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Resource:MetaCrop

Name: Resource:MetaCrop
Description:

MetaCrop contains hand-curated information of about 40 major metabolic pathways in various crop plants with special emphasis on the metabolism of agronomically important organs such as seed or tuber.

Species of both monocotyledons and dicotyledons are represented. Reactions incorporate information about involved metabolites, stoichiometry, and detailed location (species, organ, tissue, compartment, and developmental stage). Furthermore, for central metabolism (glycolysis, TCA cycle) kinetic data is available for the reactions. References and relevant PubMed IDs are given. In order to have a controlled vocabulary allowing the comparison of data from different sources ontology terms were used. In total, the database currently contains information for 6 major crop plants (about 400 enzymatic reactions, 60 transport processes, 6 compartments, and 600 references) and initial information for several more crop plants. All information was extracted manually through an extensive survey of literature and online databases.
Other Name(s): MetaCrop
Parent Organization: Leibniz Institute of Plant Genetics and Crop Plant Research
Resource Type(s): database
Resource: Resource
URL: http://metacrop.ipk-gatersleben.de
*Id: nif-0000-03113
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Curated

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Facts about Resource:MetaCropRDF feed
CurationStatusuncurated  +
DefiningCitationhttp://metacrop.ipk-gatersleben.de  +
Definition

MetaCrop contains hand-curated inf
MetaCrop contains hand-curated information of about 40 major metabolic pathways in various crop plants with special emphasis on the metabolism of agronomically important organs such as seed or tuber.

Species of both monocotyledons and dicotyledons are represented. Reactions incorporate information about involved metabolites, stoichiometry, and detailed location (species, organ, tissue, compartment, and developmental stage). Furthermore, for central metabolism (glycolysis, TCA cycle) kinetic data is available for the reactions. References and relevant PubMed IDs are given. In order to have a controlled vocabulary allowing the comparison of data from different sources ontology terms were used. In total, the database currently contains information for 6 major crop plants (about 400 enzymatic reactions, 60 transport processes, 6 compartments, and 600 references) and initial information for several more crop plants. All information was extracted manually through an extensive survey of literature and online databases.
of literature and online databases.
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-03113  +
Is part ofLeibniz Institute of Plant Genetics and Crop Plant Research  +
LabelResource:MetaCrop  +
ModifiedDate18 May 2011  +
Page has default formThis property is a special property in this wiki.Resource  +
SuperCategoryResource  +
SynonymMetaCrop  +