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Gold standard

Name: Gold standard
Description: A resource that has become the standard or authority in a particular domain.
Synonym(s): Gold standard or authority
Super-category: NIF annotation standard
*Id: nlx_37000
Link to OWL / RDF: Download this content as OWL/RDF


Detail

Synonym Has role Is part of DefiningCitation
Resource:AceView AceView genes Database Resource:NCBI http://www.ncbi.nih.gov/IEB/Research/Acembly/
Resource:ArchSchema ArchSchema - graphs of related Pfam domain architectures Data analysis service
Source code
Software application
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/archschema/
Resource:ArrayExpress Archive ArrayExpress - functional genomics data Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/arrayexpress/
Resource:BFO Basic Formal Ontology Ontology Resource:IFOMIS http://www.ifomis.org/bfo
Resource:BioCreative Critical Assessment of Information Extraction systems in Biology
BioCreAtIvE challenge evaluation
BioCreAtIvE - Critical Assessment for Information Extraction in Biology
Topical portal
Data set
Challenge
Benchmark
http://biocreative.sourceforge.net/
Resource:BioMart MartView MartView
BioMart Central Portal
Data set
Web service
http://www.biomart.org/biomart/martview/ddb9ce1ad275cde372c968d13fa11f5f
Resource:BioMart Project BioMart software Software resource
Web service
Resource:Ontario Institute for Cancer Research
Resource:European Bioinformatics Institute
http://www.biomart.org
Resource:BioModels Database BioModels Database
BioModels
BioModels Database - A Database of Annotated Published Models
Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/biomodels-main/
Resource:BioSample Database at EBI BioSample Database at the EBI
BioSample Database
BioSD - BioSample Database
BioSD at EBI
BioSamples database
BioSamples Database at EBI
EBI BioSample Database
BioSamples
Database
Biomaterial supply resource
Cell repository
Biospecimen repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/biosamples/
Resource:Bookshelf NCBI Bookshelf Database
Book
Storage service resource
Resource:NCBI http://www.ncbi.nlm.nih.gov/sites/entrez?db=books
Resource:CBLAST NCBI Related Structures
NCBI Related Structure Search
Analysis service resource
3D spatial image
Resource:NCBI http://www.ncbi.nlm.nih.gov/Structure/cblast/cblast.cgi?
Resource:CHEBI Chemical Entities of Biological Interest Database
Ontology
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/chebi/
Resource:COBALT: Constraint-based Multiple Alignment Tool NCBI COBALT
NCBI Constraint-based Multiple Alignment Tool
Constraint-based Multiple Alignment Tool
Software resource Resource:NCBI http://www.ncbi.nlm.nih.gov/tools/cobalt/cobalt.cgi?link_loc=BlastHomeAd
Resource:COG COGs
Clusters of Orthologous Groups of proteins
COGs - Phylogenetic classification of proteins encoded in complete genomes
COG Database
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/COG
Resource:CSA - Catalytic Site Atlas Catalytic Site Atlas Software resource
Database
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/CSA/
Resource:Cardiovascular Gene Ontology Annotation Initiative Cardiovascular Gene Ontology
Cardiovascular GO Annotation Initiative
Data set University College London; London; United Kingdom http://www.ucl.ac.uk/cardiovasculargeneontology/
Resource:ChEMBLdb ChEMBL database Database Resource:European Bioinformatics Institute https://www.ebi.ac.uk/chembl/
Resource:CiteXplore literature searching CiteXplore Database
Web service
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/citexplore/
Resource:CluSTr CluS+Tr Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/clustr/
Resource:Consensus CDS NCBI Consensus CDS protein set
CCDS Database
NCBI CCDS Database
Database Resource:NCBI
Resource:European Bioinformatics Institute
Wellcome Trust Sanger Institute; Hinxton; United Kingdom
University of California at Santa Cruz; California; USA
http://www.ncbi.nlm.nih.gov/CCDS/
Resource:Conserved Domain Database Conserved Domains Database
Conserved Domains
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/cdd
Resource:DDBJ - DNA Data Bank of Japan DNA Data Bank of Japan
DNA DataBank of Japan
DDBJ - DNA Data Bank of Japan
Database
Data repository
National Institute of Genetics; Shizuoka; Japan http://www.ddbj.nig.ac.jp
Resource:DOI Digital Object Identifier
Resolve A DOI Name
DOI System
Digital Object Identifier System
International standard specification International DOI Foundation http://www.doi.org/
Resource:Database of Genomic Variants Archive DGVarchive Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/dgva/
Resource:Database of Secondary Structure Assignments Software resource
Database
Radboud University Nijmegen; Nijmegen; Netherlands http://swift.cmbi.ru.nl/gv/dssp/
Resource:Database of expressed sequences or mRNA dbEST Data repository
Database
Resource:NCBI http://www.ncbi.nlm.nih.gov/dbEST/
Resource:Drug Development Tools Qualification Programs Drug Development Tools (DDT) Qualification Programs Portal
Standard specification
U.S. Food and Drug Administration http://www.fda.gov/drugs/developmentapprovalprocess/drugdevelopmenttoolsqualificationprogram/default.htm
Resource:EB-eye Search Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/ebisearch/
Resource:EBI Dbfetch Dbfetch
Database fetch
emblfetch
EMBL fetch
Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/Tools/dbfetch/dbfetch
Resource:EBI Genomes Genomes Pages - At the EBI
ENA Genomes Server
Data set Resource:European Bioinformatics Institute http://www.ebi.ac.uk/genomes
Resource:ENA Sequence Version Archive Sequence Version Archive
EMBL-SVA
Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/cgi-bin/sva/sva.pl/
Resource:ENZYME Enzyme nomenclature database Database
Data repository
Resource:Swiss Institute of Bioinformatics http://www.expasy.org/enzyme/
Resource:Electron Microscopy Data Bank Electron Microscopy Data Bank (EMDB) at PDBe
Electron Microscopy Data Bank at PDBe
Electron Microscopy DataBank
Electron Microscopy DataBank at PDBe
Database
Data analysis service
Data repository
Resource:PDBe - Protein Data Bank in Europe http://www.ebi.ac.uk/pdbe/emdb/
Resource:Ensembl Database
Data analysis service
Web service
Resource:European Bioinformatics Institute
Wellcome Trust Sanger Institute; Hinxton; United Kingdom
http://www.ensembl.org/
Resource:Ensembl Genomes Ensembl Genome
EnsemblGenomes
Ensembl Genomes: Extending Ensembl across the taxonomic space
Database
Web service
Resource:European Bioinformatics Institute http://www.ensemblgenomes.org/
Resource:Entrez GEO Profiles GEO Profiles
Gene Expression Omnibus Profiles
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/sites/entrez?db=geo
Resource:Enzyme Nomenclature Database
International standard specification
Data repository
Data set
Queen Mary University of London; London; United Kingdom http://www.chem.qmul.ac.uk/iubmb/enzyme/
Resource:Enzyme Structures Database Database
Image collection
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/enzymes/
Resource:Europe PubMed Central UK PubMed Central Database
Bibliography
Web service
Europe PMC Funders Group
Resource:European Bioinformatics Institute
Resource:Mimas
Resource:National Centre for Text Mining
British Library
http://europepmc.org/
Resource:European Genome-phenome Archive Data set
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/ega/
Resource:European Nucleotide Archive Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/ena/
Resource:Exacerbations of Chronic Pulmonary Disease Tool Exacerbations of Chronic Pulmonary Disease Tool (EXACT)
EXACT-PRO
Exacerbation of Chronic Pulmonary Disease Tool Patient Reported Outcome (EXACT-PRO) Instrument
Exacerbation of Chronic Pulmonary Disease Tool Patient Reported Outcome Instrument
Standard specification
Assessment test provider
Resource:Drug Development Tools Qualification Programs http://www.fda.gov/downloads/Drugs/GuidanceComplianceRegulatoryInformation/Guidances/UCM380961.pdf
Resource:Experimental Factor Ontology Ontology Resource:European Bioinformatics Institute http://www.ebi.ac.uk/efo/
Resource:FSSP - Families of Structurally Similar Proteins families of structurally similar proteins Data set Resource:European Bioinformatics Institute http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+LibInfo+-lib+FSSP
Resource:FunTree Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/FunTree/
Resource:GENSAT at NCBI - Gene Expression Nervous System Atlas Database Resource:NCBI http://www.ncbi.nlm.nih.gov/projects/gensat/
Resource:GO GO - Gene Ontology
Gene Ontology
the Gene Ontology
Ontology
International standard specification
Database
Gene Ontology Consortium http://www.geneontology.org/
Resource:GOA Gene Ontology Annotation
UniProtKB-GOA
Gene Ontology Annotation (UniProtKB-GOA) Database
GO Annotation at EBI
Data set Resource:European Bioinformatics Institute http://www.ebi.ac.uk/GOA
Resource:GenBank Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/Genbank/
Resource:Gene Expression Atlas Database
Expression atlas
Blog
Web service
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/gxa/
Resource:Gene Expression Omnibus NCBI GEO Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/geo/
Resource:Genome Reviews Genome Reviews Database Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/GenomeReviews/
Resource:Genome survey sequence database dbGSS
Entrez GSS
NCBI dbGSS
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/sites/entrez?db=nucgss, http://www.ncbi.nlm.nih.gov/dbGSS/
Resource:HGNC genenames.org
HUGO Gene Nomenclature Committee
HGNC Database
HGNC - HUGO Gene Nomenclature Committee
Human Genome Organization Gene Symbols
International standard specification
Database
Ontology
Service resource
Resource:European Bioinformatics Institute http://www.genenames.org/
Resource:HIV-1, Human Protein Interaction Database HIV-1 Protein Interaction Database Database Resource:NCBI http://www.ncbi.nlm.nih.gov/RefSeq/HIVInteractions/index.html
Resource:HSSP Homology-derived Secondary Structure of Proteins
Homology derived Secondary Structure of Proteins
homology-derived structures of proteins
HSSP database
HSSP - Homology derived Secondary Structure of Proteins
Database Radboud University Nijmegen; Nijmegen; Netherlands http://swift.cmbi.ru.nl/gv/hssp/
Resource:High Throughput Genomic Sequences Division HTG Sequence
HTG database
NCBI High-Throughput Genomic Sequences
High-Throughput Genomic Sequences
HTG GenBank Division
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/HTGS/
Resource:HomoloGene NCBI HomoloGene Service resource
Database
Resource:NCBI http://www.ncbi.nlm.nih.gov/homologene
Resource:Human Proteomics Initiative Human Proteome Initiative
UniProtKB/Swiss-Prot Human Proteome Initiative
Database Resource:Swiss Institute of Bioinformatics http://www.ebi.ac.uk/swissprot/hpi/hpi.html
Resource:IBIS: Inferred Biomolecular Interactions Server NCBI Inferred Biomolecular Interactions Server
Inferred Biomolecular Interactions Server
Data analysis service
Database
Resource:NCBI http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi
Resource:ILSI HESI Drug-induced Nephrotoxicity Biomarkers International Life Sciences Institute / Health and Environmental Sciences Institute Nephrotoxicity Working Group Drug-induced Nephrotoxicity Biomarkers
HESI Drug-induced Nephrotoxicity Biomarkers
ILSI / HESI Nephrotoxicity Working Group Drug-induced Nephrotoxicity Biomarkers
Standard specification Resource:Drug Development Tools Qualification Programs http://www.fda.gov/downloads/Drugs/DevelopmentApprovalProcess/DrugDevelopmentToolsQualificationProgram/UCM285010.pdf
Resource:IMGT - the international ImMunoGeneTics information system IMGT/LIGM
ImMunoGeneTics
ImMunoGeneTics Information System
Topical portal
Database
Data analysis service
Centre National de la Recherche Scientifique
Montpellier 2 University; Montpellier; France
http://www.imgt.org/
Resource:IMGT/HLA International ImMunoGeneTics/Human Leukocyte Antigen Database
IMGT/HLA Database
IMGT/HLA DB
Database
Data repository
Resource:European Bioinformatics Institute
Anthony Nolan Research Institute
Resource:IMGT - the international ImMunoGeneTics information system
http://www.ebi.ac.uk/imgt/hla/
Resource:IPD - Immuno Polymorphism Database IPD - The Immuno Polymorphism Database
IPD-The Immuno Polymorphism Database
Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/ipd/
Resource:IUPHAR International Union of Basic and Clinical Pharmacology
International Union of Pharmacology
Knowledge environment resource
Narrative resource
International standard specification
Meeting resource
http://www.iuphar.org/
Resource:IUPHAR Database International Union of Pharmacology Database
International Union of Basic and Clinical Pharmacology Database
Database
International standard specification
Resource:NC-IUPHAR http://www.iuphar-db.org
Resource:IntAct Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/intact
Resource:IntEnz- Integrated relational Enzyme database Database Resource:European Bioinformatics Institute
Resource:Swiss Institute of Bioinformatics
http://www.ebi.ac.uk/intenz
Resource:InterPro InterPro protein sequence analysis and classification
InterPro: protein sequence analysis & classification
Data analysis service
Database
Web service
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/interpro
Resource:MEDLINE Database
Bibliography
National Library of Medicine http://www.nlm.nih.gov/bsd/pmresources.html
Resource:MGI Mouse Genome Informatics Database
Data repository
Resource:Jackson Laboratory http://www.informatics.jax.org
Resource:MaizeGDB Maize Genetics and Genomics Database Organism-related portal
Database
Data analysis service
Data repository
University of Maryland; Maryland; USA http://www.maizegdb.org
Resource:MeSH Medical Subject Headings
MeSH (Medical Subject Headings)
Controlled vocabulary National Library of Medicine http://www.nlm.nih.gov/mesh
Resource:MedlinePlus MedlinePlus Health Topics Database
Video resource
National Library of Medicine http://www.nlm.nih.gov/medlineplus/druginformation.html
Resource:Molecular Imaging and Contrast Agent Database Molecular Imaging and Contrast Agent Database (MICAD) Database
Book
Data set
Resource:NCBI http://www.ncbi.nlm.nih.gov/books/NBK5330/
Resource:Molecular Modeling DataBase Entrez Structure
Structure database
NCBI Structure
Structure (Molecular Modeling Database)
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/structure
Resource:NC-IUPHAR International Union of Basic and Clinical Pharmacology Committee on Receptor Nomenclature and Drug Classification International standard specification
Narrative resource
Resource:IUPHAR http://www.iuphar.org/nciuphar.html
Resource:NCBI BLAST NCBI BLAST: Basic Local Alignment Search Tool
Basic Local Alignment Search Tool
Data analysis service Resource:NCBI http://blast.ncbi.nlm.nih.gov/Blast.cgi
Resource:NCBI BioProject NCBI BioProject Database Database Resource:NCBI http://www.ncbi.nlm.nih.gov/bioproject
Resource:NCBI BioSample BioSample Database
NCBI BioSample Database
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/biosample
Resource:NCBI BioSystems Database NCBI BioSystems
BioSystems Database
Database
Data analysis service
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/biosystems/
Resource:NCBI EST EST Database
Expressed Sequence Tag Database
NCBI dbEST
dbEST: database of "Expressed Sequence Tags"
Entrez EST
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/nucest
Resource:NCBI Epigenomics National Center for Biotechnology Information Epigenomics
NCBI Epigenomic Gateway
NCBI Epigenomic Hub
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/epigenomics
Resource:NCBI GEO DataSets Gene Expression Omnibus DataSets
Gene Expression Omnibus Data Sets
NCBI GEO Data Sets
GEO Data Sets
Entrez GEO DataSets
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/gds
Resource:NCBI GenBank via FTP GenBank via FTP Database Resource:NCBI http://www.ncbi.nlm.nih.gov/genbank/GenBankFtp.html
Resource:NCBI Gene Gene Database
Entrez Gene
Gene - Gene and mapped phenotypes
Gene - Gene mapped phenotypes
GeneID
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/gene
Resource:NCBI Genome Genome Database
Genome: Information by genome sequence
Entrez Genomes
Entrez Genome
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/genome
Resource:NCBI Nucleotide CoreNucleotide
Nucleotide Database
Nucleotide
Entrez Nucleotide
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/nucleotide
Resource:NCBI Popset Entrez PopSet Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/popset
Resource:NCBI Probe NCBI Probe Database
Probe Database
ProbeDB
Entrez Probe Database
dbProbe
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/probe
Resource:NCBI Protein Protein Database
Entrez Protein Database
Protein sequence database
Entrez Protein
NCBI Protein Database
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/protein
Resource:NCBI Resource List NCBI Resource Guide
NCBI Resource List (A-Z)
Organization portal Resource:NCBI http://www.ncbi.nlm.nih.gov/guide/sitemap/
Resource:NCBI Sequence Read Archive Sequence Read Archive
NCBI SRA
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/sra
Resource:NCBI Structure Database Resource:NCBI http://www.ncbi.nlm.nih.gov/structure
Resource:NCBI Structure: Cn3D Cn3D 3D visualization software Resource:NCBI http://www.ncbi.nlm.nih.gov/Structure/CN3D/cn3d.shtml
Resource:NCBI Taxonomy Taxonomy Browser
Entrez Taxonomy Browser
NCBI Taxonomy Database
NCBI Taxonomy Browser
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/taxonomy/
Resource:NCBI dbRBC dbRBC Database Topical portal
Database
Resource:NCBI
Medical University of Graz; Graz; Austria
http://www.ncbi.nlm.nih.gov/projects/gv/rbc/main.fcgi?cmd=init
Resource:NEWT UniProt Taxonomy Database
UniProt Taxonomy
UniProtKB taxonomy database
Database Resource:UniProt http://www.uniprot.org/taxonomy/
Resource:NLM Catalog Database Resource:NCBI http://www.ncbi.nlm.nih.gov/sites/entrez?db=journals
Resource:OBO OBO Foundry
Open Biological and Biomedical Ontologies
Open Biological and Biomedical Ontology Foundry
Standard specification
Ontology
Knowledge environment resource
Resource:Berkeley Bioinformatics Open-Source Projects http://www.obofoundry.org/
Resource:OBrien Reagan York and Jacobsen Drug-induced Cardiotoxicity Biomarkers O'Brien Reagan York and Jacobsen Drug-induced Cardiotoxicity Biomarkers Standard specification Resource:Drug Development Tools Qualification Programs http://www.fda.gov/downloads/Drugs/DevelopmentApprovalProcess/DrugDevelopmentToolsQualificationProgram/UCM294644.pdf
Resource:OMIA - Online Mendelian Inheritance in Animals Online Mendelian Inheritance in Animals Database University of Sydney; Sydney; Australia
Resource:NCBI
http://omia.angis.org.au/
Resource:OMIM OMIM - Online Mendelian Inheritance in Man
Online Mendelian Inheritance in Man
Database Johns Hopkins University School of Medicine; Maryland; USA
Resource:NCBI
http://omim.org
Resource:Ontology Lookup Service OLS - Ontology Lookup Service
Ontology Lookup Service (OLS)
Database
Web service
Source code
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/ontology-lookup/
Resource:PANDIT : Protein and Associated Nucleotide Domains with Inferred Trees Protein and Associated Nucleotide Domains with Inferred Trees Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/goldman-srv/pandit
Resource:PDB Protein Data Bank
RCSB Protein Data Bank
Research Collaboratory for Structural Bioinformatics Protein Data Bank
Protein Databank
Database
Web service
Data repository
University of California at San Diego; California; USA
Rutgers University; New Jersey; USA
http://www.rcsb.org/pdb/
Resource:PDBe - Protein Data Bank in Europe Protein Data Bank in Europe
Protein Data Bank Europe
Protein DataBank in Europe
Protein DataBank Europe
Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/pdbe/
Resource:PDBj - Protein Data Bank Japan Protein Data Bank Japan Database
Data repository
Osaka University; Osaka; Japan http://www.pdbj.org/
Resource:PDBsum Database
3D spatial image
Data analysis service
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/pdbsum
Resource:PIR Protein Information Resource
PIR - Protein Information Resource
Topical portal
Data analysis service
Database
University of Delaware; Delaware; USA
Georgetown University; Washington D.C.; USA
http://proteininformationresource.org/
Resource:PSTC Nephrotoxicity Biomarkers Predictive Safety and Testing Consortium Drug-induced Nephrotoxicity Biomarkers
PSTC NWG Drug-induced Nephrotoxicity Biomarkers
Standard specification Resource:Drug Development Tools Qualification Programs
Resource:Predictive Safety Testing Consortium
http://www.fda.gov/downloads/Drugs/DevelopmentApprovalProcess/DrugDevelopmentToolsQualificationProgram/UCM382536.pdf
Resource:Parasite genome databases and genome research resources Parasite Genome Database Database
Topical portal
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/parasites/parasite-genome.html
Resource:Patent Abstracts Database Resource:European Bioinformatics Institute http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+query+-libList+PATABS
Resource:Patent Data Resources Patent Data Resources at EBI Topical portal Resource:European Bioinformatics Institute http://www.ebi.ac.uk/patentdata/
Resource:ProFunc ProFunc: Analysis of a protein's 3D structure to help identify its likely biochemical function
ProFunc - prediction of protein function from 3D structure
Data analysis service Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/profunc/index.html
Resource:Protein Clusters Protein Clusters Database
Entrez Protein Clusters
NCBI Protein Clusters
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/proteinclusters
Resource:PubChem Database
Service resource
Data repository
Resource:NCBI http://pubchem.ncbi.nlm.nih.gov/
Resource:PubChem BioAssay NCBI PubChem BioAssay
PubChem BioAssay Database
Service resource
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/sites/entrez?db=pcassay&cmd=search
Resource:PubChem Compound PubChem Compound Database
PubChem Compounds Database
Pccompound
3D spatial image
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/pccompound
Resource:PubChem Substance PubChem Substance Database
PubChem Substances Database
Pcsubstance
3D spatial image
Database
Data repository
Resource:PubChem
Resource:NCBI
http://www.ncbi.nlm.nih.gov/pcsubstance?db=pcsubstance
Resource:PubMed Pub Med Database Resource:NCBI http://www.ncbi.nlm.nih.gov/pubmed/
Resource:PubMed Central Database
Storage service resource
Resource:NCBI http://www.ncbi.nlm.nih.gov/pmc/
Resource:QuickGO Quick GO Database
Ontology
Software resource
Web service
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/QuickGO/
Resource:RESID RESID Database of Protein Modifications
RESID Database
RESID Database at the EBI
RESID Database at PIR
Database Resource:PIR http://pir.georgetown.edu/resid/
Resource:RGD Rat Genome Database Data repository
Database
Medical College of Wisconsin; Wisconsin; USA http://rgd.mcw.edu
Resource:RHEA Database
Data repository
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/rhea/
Resource:Reactome Database
Data analysis service
Resource:Ontario Institute for Cancer Research
Resource:Cold Spring Harbor Laboratory
Resource:European Bioinformatics Institute
New York University School of Medicine; New York; USA
http://www.reactome.org
Resource:RefSeq NCBI RefSeq
NCBI Reference Sequence
Reference Sequence
NCBI Reference Sequences
NCBI Reference Sequence Database
RefSeq: NCBI Reference Sequence Database
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/RefSeq/
Resource:SAS - Sequence Annotated by Structure Sequence Annotated by Structure Data analysis service Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/sas/
Resource:SBO Systems Biology Ontology Ontology
Database
Resource:European Bioinformatics Institute http://www.ebi.ac.uk/sbo/
Resource:SGD Saccharomyces Genome Database Database
Data analysis service
Stanford University School of Medicine; California; USA http://www.yeastgenome.org/
Resource:SRS Sequence Retrieval System
EBI SRS server
EBI SRS
Database
Data analysis service
Resource:European Bioinformatics Institute http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+srsq2+-noSession
Resource:TAIR The Arabidopsis Information Resource Database
Data repository
Data analysis service
Carnegie Institution for Science http://www.arabidopsis.org
Resource:Taxonomy Taxonomy via SRS Database Resource:European Bioinformatics Institute http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+query+-libList+TAXONOMY
Resource:UniGene UniGene: Organized View of the Transcriptome
NCBI UniGene
Entrez UniGene
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/unigene
Resource:UniParc UniProt Archive
Sequence Archive
Database Resource:UniProt http://www.uniprot.org/uniparc/
Resource:UniParc at the EBI Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/uniparc/
Resource:UniProt UniProt: The Universal Protein Resource
Universal Protein Resource
The Universal Protein Resource
Database
Data analysis service
Data repository
Resource:European Bioinformatics Institute
Resource:Swiss Institute of Bioinformatics
Resource:PIR
http://www.uniprot.org/
Resource:UniProt Chordata protein annotation program Data set Resource:UniProt http://www.uniprot.org/program/Chordata
Resource:UniProt DAS UniProt Protein DAS Server
UniProt DAS Reference Server
Data set Resource:European Bioinformatics Institute http://www.ebi.ac.uk/uniprot-das
Resource:UniProtKB UniProt Knowledgebase Database
Data repository
Resource:UniProt http://www.uniprot.org/help/uniprotkb
Resource:UniRef at the EBI UniProt Reference Clusters
UniProt Reference Clusters database
UniProt NREF
UniProt Non-redundant Reference
UniProt Non-redundant Reference database
Database Resource:European Bioinformatics Institute http://www-test.ebi.ac.uk/uniref/
Resource:UniSTS Entrez UniSTS
NCBI UniSTS
UniSTS: Integrating Markers and Maps
Database Resource:NCBI http://www.ncbi.nlm.nih.gov/unists
Resource:UniSave UniProtKB Sequence/Annotation Version Archive Database Resource:European Bioinformatics Institute http://www.ebi.ac.uk/uniprot/unisave/?help=0&session=
Resource:Vector Alignment Search Tool Vector Alignment Search Tool (VAST) Analysis service resource Resource:NCBI http://www.ncbi.nlm.nih.gov/Structure/VAST/vast.shtml
Resource:WSDbfetch (SOAP) WSDbfetch Web service Resource:European Bioinformatics Institute http://www.ebi.ac.uk/Tools/webservices/services/dbfetch
Resource:WSsas - Web Service for the SAS tool Web Service for the SAS tool Web service Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/WSsas/
Resource:Worldwide Protein Data Bank World Wide Protein Data Bank
Worldwide Protein DataBank
World Wide Protein DataBank
Database http://www.wwpdb.org/
Resource:WormBase Worm Base Database
Data repository
Data analysis service
Wellcome Trust Sanger Institute; Hinxton; United Kingdom
California Institute of Technology; California; USA
Resource:Cold Spring Harbor Laboratory
Washington University in St. Louis; Missouri; USA
http://www.wormbase.org
Resource:Xenbase Xenbase: Xenopus laevis and tropicalis biology and genomics resource Database
Atlas
Data repository
Image repository
University of Calgary; Alberta; Canada http://www.xenbase.org/
Resource:ZFIN Zebrafish Database
Zebrafish Model Organism Database
Zebrafish Information Network
Database
Data repository
University of Oregon; Oregon; USA http://zfin.org
Resource:dbGaP at NCBI Database of Genotypes and Phenotypes (dbGaP)
Database of Genotypes and Phenotypes
NCBI dbGaP
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/gap
Resource:dbSNP Entrez SNP
Entrez SNP - Single Nucleotide Polymorphism
NCBI Single Nucleotide Polymorphism
NCBI Short Genetic Variations
NCBI Short Genetic Variations (SNV) database
NCBI Short Genetic Variations Database
SNV Database
NCBI SNV Database
dbSNP: Database for Short Genetic Variations
Database
Data repository
Resource:NCBI
National Human Genome Research Institute
http://www.ncbi.nlm.nih.gov/SNP/
Resource:dbSTS NCBI dbSTS
dbSTS: database of "Sequence Tagged Sites"
NCBI dbSTS: database of "Sequence Tagged Sites"
Database of Sequence Tagged Sites
Sequence Tagged Sites Database
Database
Data repository
Resource:NCBI http://www.ncbi.nlm.nih.gov/dbSTS/

 

Contributors

Aarnaud



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Facts about Gold standardRDF feed
CurationStatusuncurated  +
DefinitionA resource that has become the standard or authority in a particular domain.
Idnlx_37000  +
LabelGold standard  +
ModifiedDate30 July 2014  +
SuperCategoryNIF annotation standard  +
SynonymGold standard or authority  +