Resource:NIF Data Federation

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Resource:NIF Data Federation

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Name:	Resource:NIF Data Federation
Description:	The NIF Data Federation partners with the community to expose and simultaneously drill down into these individual databases and data sets and return relevant content. This type of content, part of the so called “hidden Web,” is typically not indexed by existing web search engines. Every record links back to the originating site. In order for NIF to directly query these independently maintained databases and datasets, database providers must register their database or dataset with the NIF Data Federation and specify permissions. Databases are concept mapped for ease of sharing and to allow better understanding of the results. Learn more about registering your resource, http://neuinfo.org/nif_components/disco/interoperation.shtm Search results are displayed under the Data Federation tab and are categorized by data type and nervous system level. In this way, users can easily step through the content of multiple resources, all from the same interface. Each federated resource individually displays their query results with links back to the relevant datasets within the host resource. This allows users to take advantage of additional views on the data and tools that are available through the host database. The NIF site provides tutorials for each resource, indicated by the "Professor Icon" professor icon showing users how to navigate the results page once directed there through the NIF. Additionally, query results may be exported as an Excel document. Note: NIF is not responsible for the availability or content of these external sites, nor does NIF endorse, warrant or guarantee the products, services or information described or offered at these external sites. NIF Integrated Databases: Theses NIF created "virtual" databases combine related data indexed from multiple databases and combine them into one view for easier browsing. NIF Integrated Animal View NIF Integrated Brain Gene Expression View NIF Integrated Disease View NIF Integrated Nervous System Connectivity View NIF Integrated Podcasts View NIF Integrated Software View NIF Integrated Video View NIF Integrated Jobs NIF Integrated Blogs For a listing of the Federated Databases see, http://neuinfo.org/mynif/databaseList.php or refer to the "Related To" NIF Data Federation below.
Other Name(s):	Neuroscience Information Framework Data Federation
Parent Organization:	Resource:Neuroscience Information Framework
Supporting Agency:	NIDA, U.S. Department of Health and Human Services, Resource:NIH Blueprint for Neuroscience Research
Resource Type(s):	Portal
Keywords:	Semantics, Neuroscience, Animal, Annotation, Antibody, Biospecimen, Brain Activation Foci, Clinical Trial, Connectivity, Dataset, Disease, Drug, Grant, Image, Microarray, Model, Multimedia, Negative Data, Pathway, People, Plasmid, Registry, Software, Brain Region, Cell, Gene, Molecule, Multi-Level, Nervous System, Nervous System Function
Grant:	HHSN27120080035C
Abbreviation:	Data Federation
Resource:	Resource
URL:	http://neuinfo.org/nif/nifgwt.html?query=*
Availability:	Refer to individual databases
Address:	Neuroscience Information Framework, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0446
Id:	nlx_81822
Link to OWL / RDF:	Download this content as OWL/RDF

Categories related to Resource:NIF Data Federation

Resource:60-Second Mind, Resource:A Lady Scientist, Resource:ASAP, Resource:ASPGD, Resource:ATCC, Resource:Access-ScienceJobs.co.uk, Resource:Addgene, Resource:Aging Genes and Interventions Database, Resource:All In The Mind, Resource:Allen Mouse Brain Atlas, Resource:Allen Mouse Brain Connectivity Atlas, Resource:American Journal of Psychiatry Podcasts, Resource:AmiGO, Resource:Antibody Registry, Resource:Avian Brain Circuitry Database, Resource:BAMS Cells, Resource:BAMS Connectivity, Resource:BAMS Nested Regions, Resource:BMI (Brain Machine Interface) Platform, Resource:Beta Cell Biology Consortium, Resource:BioGRID, Resource:BioNOT, Resource:BioNumbers: The Database of Useful Biological Numbers, Resource:BioPortfolio, Resource:Biocompare, Resource:Biointeractive, Resource:Bloomington Drosophila Stock Center, Resource:Brain Architecture Management System, Resource:Brain Science Podcast, Resource:BrainInfo, Resource:BrainMaps.org, Resource:BrainPod, Resource:BrainSpan: Exon microarray summarized to genes, Resource:BrainSpan: Exon microarray summarized to probe sets, Resource:BrainSpan: RNA-Seq exons, Resource:BrainSpan: RNA-Seq exons summarized to genes, Resource:Brede Database, Resource:CENtral Science, Resource:CHEBI, Resource:CIL, Resource:CRCNS, Resource:Caenorhabditis Genetics Center, Resource:Candida Genome Database, Resource:Cassandras Tears, Resource:Cell Centered Database, Resource:CellML Model Repository, Resource:Cerebellar Platform, Resource:ChEMBLdb, Resource:Clinical Trials Network (CTN) Data Share, Resource:Clinicaltrials.gov: A Service Of The National Institutes Of Health … further results

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Notes

This page uses this default form:Resource

Data Federation News

Detail

	Id	Has role	Is part of	DefiningCitation
Resource:60-Second Mind	nlx_52233	Podcast	Resource:Scientific American Podcasts	http://www.scientificamerican.com/podcast/podcasts.cfm?type=60-second-mind
Resource:A Lady Scientist	nlx_144218	Blog	Resource:LabSpaces	http://www.labspaces.net/view_blog.php?ID=581
Resource:ASAP	nif-0000-02571	Database Data repository	University of Wisconsin-Madison; Wisconsin; USA	https://asap.ahabs.wisc.edu/annotation/php/ASAP1.htm
Resource:ASPGD	nif-0000-12244	Database Data repository	Stanford University School of Medicine; California; USA Resource:Broad Institute	http://www.aspgd.org/
Resource:ATCC	nif-0000-10159	Material storage repository Reagent supplier Biomaterial supply resource Data analysis service International standard specification		http://www.atcc.org/
Resource:Access-ScienceJobs.co.uk	nlx_144183	Job resource Narrative resource		http://www.access-sciencejobs.co.uk/
Resource:Addgene	nif-0000-11872	Topical portal Biospecimen repository Biomaterial supply resource		http://www.addgene.org
Resource:Aging Genes and Interventions Database	nif-0000-23326	Database Data repository	University of Washington; Washington; USA	http://uwaging.org/genesdb/
Resource:All In The Mind	nlx_25223	Podcast	ABC Radio National	http://www.abc.net.au/rn/allinthemind/default.htm
Resource:Allen Mouse Brain Atlas	nif-0000-00508	Atlas Database	Resource:Allen Institute for Brain Science	http://mouse.brain-map.org/
Resource:Allen Mouse Brain Connectivity Atlas	nlx_146262	Spatially referenced dataset	Resource:Allen Institute for Brain Science	http://connectivity.brain-map.org/projection/
Resource:American Journal of Psychiatry Podcasts	nlx_39039	Podcast	American Journal of Psychiatry	http://ajp.psychiatryonline.org/audio.aspx
Resource:AmiGO	nif-0000-20935	Software application Database Data analysis service	Resource:GO	http://amigo.geneontology.org/cgi-bin/amigo/go.cgi
Resource:Antibody Registry	nif-0000-07730	Database Antibody supplier	Resource:Neuroscience Information Framework	http://antibodyregistry.org/
Resource:Avian Brain Circuitry Database	nif-0000-00386	Spatially referenced dataset Data repository Image repository Image collection	Szent Istvan University Faculty of Veterinary Science; Budapest; Hungary	http://www.behav.org/abcd/abcd.php
Resource:BAMS Cells	nif-0000-90175	Database	Resource:Brain Architecture Management System	http://brancusi.usc.edu/bkms/
Resource:BAMS Connectivity	nlx_144138	Database	Resource:Brain Architecture Management System	http://brancusi.usc.edu/bkms/
Resource:BAMS Nested Regions	nif-0000-10175	Database	Resource:Brain Architecture Management System	http://brancusi.usc.edu/bkms/
Resource:BMI (Brain Machine Interface) Platform	nif-0000-10378	Data repository Database Bibliography Software repository	Resource:INCF Japan Node Resource:RIKEN Brain Science Institute	http://bmi.neuroinf.jp/
Resource:Beta Cell Biology Consortium	nlx_144143	Database Community building portal Data repository Biospecimen repository Reagent supplier Cell repository Organism supplier Experimental protocol Data set	Vanderbilt University; Tennessee; USA	http://www.betacell.org/
Resource:BioGRID	nif-0000-00432	Database Web service Software resource Data repository	Princeton University; New Jersey; USA University of Edinburgh; Scotland; United Kingdom Mount Sinai Hospital; Ontario; Canada University of Montreal; Montreal; Canada	http://www.thebiogrid.org/
Resource:BioNOT	nlx_143912	Database	University of Wisconsin–Milwaukee; Wisconsin; USA	http://snake.ims.uwm.edu/bionot/index.php?searchterm=mecp2+autism&submit=Search
Resource:BioNumbers: The Database of Useful Biological Numbers	nif-0000-24396	Database	Harvard University; Massachusetts; USA	http://bionumbers.hms.harvard.edu/
Resource:BioPortfolio	nlx_144235	Narrative resource Blog Job resource Database Portal		http://www.bioportfolio.com/
Resource:Biointeractive	nlx_40070	Training resource Video resource Podcast Training material	Howard Hughes Medical Institute	http://www.hhmi.org/biointeractive/
Resource:Bloomington Drosophila Stock Center	nif-0000-00241	Organism supplier Material storage repository	Indiana University; Indiana; USA	http://flystocks.bio.indiana.edu/bloomhome.htm
Resource:Brain Architecture Management System	nif-0000-00018	Database Ontology Data repository	University of Southern California; California; USA	http://brancusi.usc.edu/bkms/
Resource:Brain Science Podcast	nlx_47745	Podcast Narrative resource		http://www.brainsciencepodcast.com/
Resource:BrainInfo	nif-0000-00019	Atlas Database Topical portal Standard specification	University of Washington; Washington; USA University of California at San Diego; California; USA	http://braininfo.rprc.washington.edu
Resource:BrainMaps.org	nif-0000-00093	Atlas Image repository	University of California at Davis; California; USA	http://brainmaps.org
Resource:BrainPod	nlx_77376	Podcast	Nature Neuropsychopharmacology	http://www.nature.com/npp/podcast/index.html
Resource:BrainSpan: Exon microarray summarized to genes	nlx_23971	Expression atlas	Resource:BrainSpan: Atlas of the Developing Human Brain	http://brainspan.org/rnaseq/downloads.html?format=html
Resource:BrainSpan: Exon microarray summarized to probe sets	nlx_86215	Expression atlas	Resource:BrainSpan: Atlas of the Developing Human Brain	http://brainspan.org/rnaseq/downloads.html?format=html
Resource:BrainSpan: RNA-Seq exons	nlx_37081	Expression atlas	Resource:BrainSpan: Atlas of the Developing Human Brain	http://brainspan.org/rnaseq/downloads.html?format=html
Resource:BrainSpan: RNA-Seq exons summarized to genes	nlx_98194	Expression atlas	Resource:BrainSpan: Atlas of the Developing Human Brain	http://brainspan.org/rnaseq/downloads.html?format=html
Resource:Brede Database	nif-0000-00064	Database Data analysis service	Technical University of Denmark; Copenhagen; Denmark	http://hendrix.imm.dtu.dk/services/jerne/brede/
Resource:CENtral Science	nlx_144206	Blog	American Chemical Society	http://cenblog.org/
Resource:CHEBI	nif-0000-02655	Database Ontology	Resource:European Bioinformatics Institute	http://www.ebi.ac.uk/chebi/
Resource:CIL	nif-0000-37639	Database Image repository	Resource:American Society for Cell Biology	http://www.cellimagelibrary.org/
Resource:CRCNS	nif-0000-00255	Data set Data repository Funding resource	University of California at Berkeley; California; USA	http://crcns.org
Resource:Caenorhabditis Genetics Center	nif-0000-00240	Organism supplier Biospecimen repository Standard specification Cell repository	University of Minnesota Twin Cities; Minnesota; USA	http://www.cbs.umn.edu/CGC/
Resource:Candida Genome Database	nif-0000-02634	Database Data repository Data analysis service	Stanford University School of Medicine; California; USA	http://www.candidagenome.org/
Resource:Cassandras Tears	nlx_144234	Blog	Resource:WordPress	http://ogremk5.wordpress.com/
Resource:Cell Centered Database	nif-0000-00007	Database Data repository Image collection	University of California at San Diego; California; USA	http://ccdb.ucsd.edu
Resource:CellML Model Repository	nif-0000-20828	Database Data repository	Resource:CellML	http://www.cellml.org/models
Resource:Cerebellar Platform	nif-0000-10193	Database Software repository Data repository Data analysis software	Resource:INCF Japan Node Resource:RIKEN Brain Science Institute	http://platform.cerebellum.neuroinf.jp/
Resource:ChEMBLdb	nlx_54579	Database	Resource:European Bioinformatics Institute	https://www.ebi.ac.uk/chembldb/index.php
Resource:Clinical Trials Network (CTN) Data Share	nif-0000-21981	Data set	National Institute on Drug Abuse	http://www.ctndatashare.org/
Resource:Clinicaltrials.gov: A Service Of The National Institutes Of Health	nif-0000-21091	Database Data repository	National Institutes of Health	http://clinicaltrials.gov/
Resource:CoCoMac (Collations of Connectivity Data on the Macaque Brain)	nif-0000-00022	Database Data visualization software Data repository Bibliography	Resource:German Neuroinformatics Node	http://cocomac.g-node.org/drupal/
Resource:Comparative Toxicogenomics Database	nif-0000-02683	Database Data analysis service	Resource:Mount Desert Island Biological Laboratory North Carolina State University; North Carolina; USA	http://ctd.mdibl.org
Resource:DISCO	nlx_143827	Software resource Service resource	Resource:Neuroscience Information Framework Yale School of Medicine; Connecticut; USA	http://disco.neuinfo.org
Resource:Daily Scan	nlx_144233	Narrative resource Blog	Resource:GenomeWeb	http://www.genomeweb.com/newsletter/daily-scan
Resource:Daring Nucleic Adventures - genegeek	nlx_144219	Blog	Resource:LabSpaces	http://www.labspaces.net/DNA
Resource:DictyBase	nif-0000-02751	Database Biomaterial supply resource Organism supplier Data analysis service Biospecimen repository	Northwestern University; Illinois; USA	http://dictybase.org/
Resource:Discover Magazine	nlx_144214	Narrative resource Blog Podcast Image collection	Kalmbach Publishing Co.	http://discovermagazine.com/
Resource:Disorders index from the National Institute of Neurological Disorders and Stroke (NINDS)	nif-0000-23200	Data set	National Institute of Neurological Disorders and Stroke	http://www.ninds.nih.gov/disorders/disorder_index.htm
Resource:Drug Related Gene Database	nif-0000-37443	Database Data repository	Resource:Neuroscience Information Framework	https://confluence.crbs.ucsd.edu/display/NIF/DRG
Resource:DrugBank	nif-0000-00417	Database	University of Alberta; Alberta; Canada	http://www.drugbank.ca/
Resource:EEGbase	nif-0000-08190	Data repository Database	University of West Bohemia; Pilsen; Czech Republic	http://eegdatabase.kiv.zcu.cz/
Resource:EU Clinical Trials Register	nlx_151313	Database	European Medicines Agency	https://www.clinicaltrialsregister.eu
Resource:EcoCyc	nif-0000-02783	Database	Resource:Stanford Research Institute International	http://ecocyc.org/
Resource:ExactAntigen / Labome	nif-0000-00384	Database Reagent supplier Service resource		http://www.exactantigen.com
Resource:Expression Atlas of the Marmoset	nlx_149225	Data set Expression atlas	Resource:RIKEN Brain Science Institute	http://www.jneurosci.org/content/32/15/5039.full
Resource:F1000 Posters	nlx_20701	Storage service resource Narrative resource Analysis service resource	Resource:F1000: Faculty of 1000 Post-Publication Peer Review	http://posters.f1000.com/posters
Resource:FLYBASE	nif-0000-00558	Database Data repository Organism-related portal Data analysis service	Harvard University; Massachusetts; USA University of Cambridge; Cambridge; United Kingdom Indiana University; Indiana; USA University of New Mexico; New Mexico; USA	http://flybase.org/
Resource:GENSAT - Gene Expression Nervous System Atlas	nif-0000-00130	Atlas Organism supplier Biomaterial manufacture Biomaterial supply resource	Rockefeller University; New York; USA	http://www.gensat.org/
Resource:GO	nif-0000-02915	Ontology International standard specification Database Data repository	Gene Ontology Consortium Resource:OBO	http://www.geneontology.org/
Resource:GWAS: Catalog of Published Genome-Wide Association Studies	nif-0000-06666	Bibliographic database	National Human Genome Research Institute	http://www.genome.gov/gwastudies
Resource:Gait Dynamics in Neuro-Degenerative Disease Data Base	nlx_64373	Downloadable Database Web accessible database	Resource:Physiobank	http://www.physionet.org/physiobank/database/gaitndd/
Resource:Gait in Parkinsons Disease	nlx_48903	Downloadable Database	Resource:Physiobank	http://www.physionet.org/physiobank/database/gaitpdb/
Resource:Gemma	nif-0000-08127	Database Data processing software Data repository	University of British Columbia; British Columbia; Canada	http://www.chibi.ubc.ca/Gemma
Resource:Gene Expression Omnibus	nif-0000-00142	Database Data repository Service resource Data set	Resource:NCBI	http://www.ncbi.nlm.nih.gov/geo/
Resource:Gene Ontology Tools	nlx_146273	Software repository Registry	Resource:GO	http://www.geneontology.org/GO.tools.shtml
Resource:Gene Weaver	nif-0000-00517	Web accessible database Data analysis service Data repository	Resource:Jackson Laboratory	http://www.GeneWeaver.org
Resource:GeneDB Lmajor	nlx_60997	Database Data analysis service	Resource:GeneDB	http://www.genedb.org/Homepage/Lmajor
Resource:GeneDB Pfalciparum	nlx_13809	Database	Resource:GeneDB	http://www.genedb.org/Homepage/Pfalciparum
Resource:GeneDB Tbrucei	nlx_78417	Database Data analysis service	Resource:GeneDB	http://www.genedb.org/Homepage/Tbruceibrucei927
Resource:GeneNetwork	nif-0000-00380	Database Data repository	University of Tennessee Health Science Center; Tennessee; USA	http://www.genenetwork.org/
Resource:Genetic Analysis Software	nif-0000-33506	Data set Software resource Software repository	Resource:Feinstein Institute for Medical Research Iowa State University; Iowa; USA	http://www.jurgott.org/linkage/ListSoftware.html
Resource:Genomes Unzipped	nlx_144200	Blog Data set Source code		http://www.genomesunzipped.org/
Resource:Glomerular Activity Response Archive	nif-0000-00339	Database Image collection Data analysis service	University of California at Irvine; California; USA	http://gara.bio.uci.edu
Resource:Gramene	nif-0000-02926	Database Web service Data analysis service	Resource:Cold Spring Harbor Laboratory Cornell University; New York; USA	http://www.gramene.org
Resource:Grants.gov	nif-0000-22393	Funding resource		http://www07.grants.gov/applicants/find_grant_opportunities.jsp
Resource:Gray Matters	nlx_54435	Podcast Narrative resource	Resource:Dana Foundation	http://www.dana.org/danaalliances/programs/graymatters/
Resource:H2SO4Hurts	nlx_144220	Blog	Resource:LabSpaces	http://www.labspaces.net/view_blog.php?ID=15
Resource:Hays	nlx_144166	Job resource Service resource		http://www.hays.co.uk/index.htm
Resource:Health.Data.gov	nlx_143714	Database Software resource Data set	Resource:Data.gov	http://www.healthdata.gov/
Resource:HomoloGene	nif-0000-02975	Web accessible database Downloadable Database Service resource	Resource:NCBI	http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=homologene
Resource:Human Brain Atlas	nif-0000-00088	Atlas Video resource	Michigan State University; Michigan; USA	https://www.msu.edu/~brains/brains/human/index.html
Resource:Human Phenotype Ontology Annotations	nlx_151835	Data set	Resource:HPO - Human Phenotype Ontology	http://www.human-phenotype-ontology.org/contao/index.php/downloads.html
Resource:IXI dataset	nlx_149360	Data set Image collection	Imperial College London; London; United Kingdom	http://brain-development.org/
Resource:Immune Epitope Database and Analysis Resource	nif-0000-03017	Database Data analysis service Web service	La Jolla Institute for Allergy and Immunology	http://www.immuneepitope.org/
Resource:Indeed	nlx_144165	Job resource		http://www.indeed.com/
Resource:International Mouse Strain Resource	nif-0000-09876	Organism supplier Cell repository	Resource:MGI Resource:MRC Mammalian Genetics Unit	http://www.findmice.org/index.jsp
Resource:Internet Brain Volume Database	nif-0000-00033	Database Web service Data analysis service	Harvard Medical School; Massachusetts; USA	http://www.cma.mgh.harvard.edu/ibvd/
Resource:It Takes 30	nlx_144232	Blog Job resource	Harvard Medical School; Massachusetts; USA	http://ittakes30.wordpress.com/
Resource:JCVI CMR	nif-0000-03555	Database Data analysis service	J. Craig Venter Institute	http://cmr.jcvi.org/tigr-scripts/CMR/CmrHomePage.cgi
Resource:Journal of Comparative Neurology Antibody database	nlx_143660	Downloadable Database	Harvard University; Massachusetts; USA	http://onlinelibrary.wiley.com/journal/10.1002/%28ISSN%291096-9861/homepage/jcn_antibody_database.htm
Resource:Journal of Visualized Experiments	nif-0000-00536	Journal Video resource Experimental protocol		http://www.jove.com/neuro
Resource:Kawasaki Disease Dataset1	nif-0000-08429	Data set	University of California at San Diego; California; USA	http://neuinfo.org/nif/nifgwt.html?query=nif-0000-08189
Resource:Kawasaki Disease Dataset2	nlx_144644	Data set	University of California at San Diego; California; USA	http://neuinfo.org/nif/nifgwt.html?query=kawasaki&category=Data%20Type:Dataset
Resource:LabSpaces	nlx_144199	Narrative resource Blog Community building portal Experimental protocol		http://www.labspaces.net/index.php
Resource:MGI	nif-0000-00096	Database Data repository	Resource:Jackson Laboratory	http://www.informatics.jax.org
Resource:MNI Podcasts	nlx_91897	Podcast	McGill University; Montreal; Canada	http://mnimedia.mcgill.ca/podcasts/
Resource:MPO	nlx_83784	Ontology	Resource:OBO Resource:MGI	http://obofoundry.org/cgi-bin/detail.cgi?id=mammalian_phenotype
Resource:Mind Hacks	nlx_48997	Blog Book		http://mindhacks.com/
Resource:ModelDB	nif-0000-00004	Database	Yale University; Connecticut; USA	http://senselab.med.yale.edu/modeldb/
Resource:Monster	nlx_144164	Job resource		http://www.monster.com/
Resource:Mouse Genome Informatics Transgenes	nif-0000-34000	Semi structured knowledge	Resource:Jackson Laboratory	ftp://ftp.informatics.jax.org/pub/reports/MGI_PhenotypicAllele.rpt
Resource:NCBI	nif-0000-00139	Organization portal Database Data repository Data analysis service Software resource	National Library of Medicine	http://www.ncbi.nih.gov/
Resource:NCBI Gene	nif-0000-02801	Web accessible database Downloadable Database	Resource:NCBI	http://www.ncbi.nlm.nih.gov/gene
Resource:NCBI Protein	nif-0000-03178	Database	Resource:NCBI	http://www.ncbi.nlm.nih.gov/sites/entrez?db=protein
Resource:NIF Integrated Animal View	nif-0000-08137	Organism supplier	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nif-0000-08137
Resource:NIF Integrated Auto-Extracted Annotation	nlx_149462	Data set	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_149462
Resource:NIF Integrated Blogs	nlx_144461	Blog Narrative resource	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_144461
Resource:NIF Integrated Brain Gene Expression View	nlx_22354	Database	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_22354
Resource:NIF Integrated Cell Lines	nlx_152524	Cell repository	Resource:Neuroscience Information Framework	https://neuinfo.org/mynif/search.php?q=*&nif=nlx_152524-1&t=indexable
Resource:NIF Integrated Clinical Trials	nlx_151342	Database	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_151342
Resource:NIF Integrated Disease View	nlx_86401	Database	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_86401
Resource:NIF Integrated Gene-Disease Interaction	nlx_151674	Database	Resource:Neuroscience Information Framework	https://neuinfo.org/mynif/search.php?q=*&nif=nlx_151674-1&t=indexable
Resource:NIF Integrated Jobs	nlx_144460	Job resource	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_144460
Resource:NIF Integrated Manually Extracted Annotation	nlx_149407	Data set	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_149407
Resource:NIF Integrated Nervous System Connectivity View	nif-0000-07732	Database	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nif-0000-07732
Resource:NIF Integrated Podcasts View	nlx_91615	Podcast	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_91615
Resource:NIF Integrated Software View	nlx_75188	Software resource	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_75188
Resource:NIF Integrated Video View	nlx_13182	Video resource	Resource:Neuroscience Information Framework	http://neuinfo.org/nif/nifgwt.html?query=nlx_13182
Resource:NIF Registry	nlx_144509	Database	Resource:Neuroscience Information Framework Resource:NeuroLex	https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_144509-1
Resource:NIF Registry Automated Crawl Data	nlx_144525	Data set	Resource:NIF Registry Resource:Neuroscience Information Framework	http://lucene1.neuinfo.org/nif_resource/monthly_results/current/
Resource:NIGMS Human Genetic Cell Repository	nlx_143798	Cell repository Biospecimen repository	Resource:Coriell Cell Repositories	http://ccr.coriell.org/Sections/Collections/NIGMS/?SsId=8
Resource:NIH Neuroscience Microarray Consortium	nif-0000-00074	Data analysis service Database Data repository	National Institutes of Health	http://neuroscienceblueprint.nih.gov/factSheet/MicronCon.htm
Resource:NIH VideoCasting	nif-0000-10454	Video resource Podcast	National Institutes of Health	http://videocast.nih.gov/
Resource:NIMH Chemical Synthesis and Drug Supply Program	nif-0000-00234	Reagent manufacture Reagent supplier	RTI International	http://nimh-repository.rti.org/
Resource:NITRC	nif-0000-00202	Community building portal Software resource Software repository	Harvard University; Massachusetts; USA	http://www.nitrc.org/
Resource:NITRC-IR	nlx_18447	Image collection Data repository	Resource:NITRC	http://www.nitrc.org/ir/app/template/Index.vm
Resource:National Academy of Sciences Podcasts	nlx_144132	Podcast	Resource:National Academy of Sciences	http://www.nasonline.org/news-and-multimedia/podcasts/
Resource:National Institutes of Health Research Portfolio Online Reporting Tool	nif-0000-10319	Web accessible database	Resource:Office of Extramural Research NIH	http://report.nih.gov/
Resource:Naturally Selected	nlx_144236	Blog	Resource:F1000: Faculty of 1000 Post-Publication Peer Review	http://blog.f1000.com/
Resource:Nature Network Blogs	nlx_144195	Blog	Resource:Nature Network	http://network.nature.com/blogs
Resource:Nature Podcast	nlx_42507	Podcast	Nature	http://www.nature.com/nature/podcast/index.html
Resource:Naturejobs	nlx_144163	Job resource Narrative resource	Resource:Nature Publishing Group	http://www.nature.com/naturejobs/science/welcome
Resource:NeuroMab	nif-0000-00175	Antibody supplier	University of California at Davis; California; USA	http://neuromab.ucdavis.edu/
Resource:NeuroMorpho.Org	nif-0000-00006	Data repository Database Image collection	George Mason University; Virginia; USA	http://neuromorpho.org/neuroMorpho
Resource:NeuroPod	nlx_34737	Podcast	Nature Neuroscience	http://www.nature.com/neurosci/neuropod/index.html
Resource:Neurodatabase.org	nif-0000-00001	Web accessible database Downloadable Database Data repository	Weill Cornell Medical College; New York; USA	http://neurodatabase.org/
Resource:Neurofed	nif-0000-10988	People resource	National Institutes of Health	http://www.sfn.org/siteobjects/published/0000BDF20016F63800FD712C30FA42DD/B7DCEFADE2FDB93B95188E3FD01E2FF0/file/Neurofed%202009c.pdf
Resource:Neurology Podcast	nlx_85698	Podcast	Resource:American Academy of Neurology	http://www.aan.com/rss/?event=feed&channel=1
Resource:NeuronDB	nif-0000-00054	Database Data analysis service	Yale University; Connecticut; USA	http://senselab.med.yale.edu/neurondb
Resource:Neuroskeptic	nlx_144523	Blog	Blogger	http://neuroskeptic.blogspot.com/
Resource:New Scientist Jobs	nlx_144176	Job resource Postdoctoral program resource	Reed Business Information	http://jobs.newscientist.com/
Resource:New York Times - Well	nlx_144224	Blog	New York Times	http://well.blogs.nytimes.com/
Resource:Novus Biologicals	nlx_143665	Antibody supplier Biomaterial manufacture Material resource Service resource		http://www.novusbio.com/
Resource:Now at NEJM	nlx_144240	Blog	New England Journal of Medicine Massachusetts Medical Society	http://blogs.nejm.org/now/
Resource:OMIA - Online Mendelian Inheritance in Animals	nif-0000-03215	Database	University of Sydney; Sydney; Australia	http://omia.angis.org.au/
Resource:OMIM	nif-0000-03216	Database	Johns Hopkins University School of Medicine; Maryland; USA Resource:NCBI	http://omim.org
Resource:Olfactory Bulb Odor Map DataBase (OdorMapDB)	nif-0000-00057	Atlas Database	Yale University; Connecticut; USA	http://senselab.med.yale.edu/odormapdb
Resource:Olfactory Receptor DataBase	nif-0000-03213	Database Data analysis service Data repository	Yale School of Medicine; Connecticut; USA	http://senselab.med.yale.edu/ordb/
Resource:One Mind Biospecimen Bank Listing	nlx_143622	Biomaterial supply resource Tissue bank Cell repository Brain bank	Resource:One Mind for Research Resource:Neuroscience Information Framework Resource:American Brain Coalition	http://neuinfo.org/onemind/index.php?q=*&b=0&r=20
Resource:Open Access Series of Imaging Studies	nif-0000-00387	Atlas Database	Howard Hughes Medical Institute Washington University School of Medicine in St. Louis; Missouri; USA Resource:Biomedical Informatics Research Network	http://www.oasis-brains.org/
Resource:Oxford Science Blog	nlx_144231	Blog	University of Oxford; Oxford; United Kingdom	http://www.ox.ac.uk/media/science_blog/
Resource:PDB	nif-0000-00135	Database 3D spatial image Web service Data analysis service Data repository	University of California at San Diego; California; USA Rutgers University; New Jersey; USA	http://www.rcsb.org/pdb/
Resource:PLoS Blogs	nif-0000-07759	Blog	Resource:PLoS	http://blogs.plos.org/
Resource:PharmGKB	nif-0000-00414	Database Data repository Web service Data set	Stanford University; California; USA	http://www.pharmgkb.org/index.jsp
Resource:Physiobank	nif-0000-00248	Database Data repository	Resource:Physionet: The Research Resource for Complex Physiologic Signals	http://physionet.org/physiobank/
Resource:PolygenicBlog	nlx_144238	Blog	Resource:Polygenic Signaling Pathways	http://polygenicpathways.blogspot.com/
Resource:PomBase	nlx_144356	Database Data repository	University of Cambridge; Cambridge; United Kingdom	http://www.pombase.org/
Resource:Protocol Online - Your labs reference book	nlx_90492	Experimental protocol		http://www.protocol-online.org/
Resource:Pseudomonas Genome Database	nif-0000-03369	Database Data analysis service	Simon Fraser University; British Columbia; Canada University of British Columbia; British Columbia; Canada	http://www.pseudomonas.com/
Resource:Psychoactive Drug Screening Program Ki Database	nif-0000-01866	Database Data repository	University of North Carolina at Chapel Hill; North Carolina; USA	http://pdsp.med.unc.edu/pdsp.php
Resource:PubChem	nlx_29861	Database Service resource Data repository 3D spatial image	Resource:NCBI	http://pubchem.ncbi.nlm.nih.gov/
Resource:PubMed Health	nlx_32805	Database	Resource:NCBI	http://www.ncbi.nlm.nih.gov/pubmedhealth/
Resource:QUEST	nlx_144230	Narrative resource Community building portal Podcast Outreach program Training material Training resource Video resource	KQED	http://science.kqed.org/quest/
Resource:RGD	nif-0000-00134	Data repository Database	Medical College of Wisconsin; Wisconsin; USA	http://rgd.mcw.edu
Resource:Reactome	nif-0000-03390	Database Data analysis service Web service Book	Resource:Ontario Institute for Cancer Research Resource:Cold Spring Harbor Laboratory Resource:European Bioinformatics Institute New York University School of Medicine; New York; USA	http://www.reactome.org
Resource:Research Blogging	nlx_144211	Blog Service resource	Seed Media Group LLC	http://researchblogging.org/
Resource:ResearchCrossroads	nif-0000-22791	Funding resource Community building portal	Innolyst Corporation	http://www.researchcrossroads.org/
Resource:Retina Project	nif-0000-25587	Spatially referenced dataset Image collection	Resource:GENSAT - Gene Expression Nervous System Atlas	http://www.gensat.org/retina.jsp
Resource:RetractionWatch.com	nif-0000-06675	Blog		http://retractionwatch.wordpress.com/
Resource:Royal College of Psychiatrists Podcasts	nlx_15826	Podcast	Resource:Royal College of Psychiatrists	http://www.rcpsych.ac.uk/pressparliament/podcasts.aspx
Resource:SFARI Gene: AutDB	nif-0000-10427	Database Data repository	Resource:SFARI - Simons Foundation Autism Research Initiative Resource:MindSpec: Informatics for Neurodevelopmental Conditions	https://gene.sfari.org/autdb/Welcome.do
Resource:SGD	nif-0000-03456	Database Data repository Standard specification Data analysis service	Stanford University School of Medicine; California; USA	http://www.yeastgenome.org/
Resource:SGN	nlx_89764	Database Data repository Data analysis service Source code	Resource:Boyce Thompson Institute for Plant Research	http://solgenomics.net/
Resource:SciLogs	nlx_144225	Blog	Spektrum der Wissenschaft	http://www.scilogs.eu/
Resource:Sciblogs	nlx_144223	Blog	Science Media Centre	http://sciblogs.co.nz/
Resource:Science Careers	nlx_144181	Job resource Narrative resource	Resource:AAAS Resource:Science Magazine	http://sciencecareers.sciencemag.org/
Resource:Science Podcast	nlx_36122	Podcast Narrative resource	AAAS Science	http://www.sciencemag.org/site/multimedia/podcast/index.xhtml
Resource:Science Talk	nlx_94534	Podcast	Resource:Scientific American Podcasts	http://www.scientificamerican.com/podcast/podcasts.cfm?type=science-talk
Resource:ScienceBlogs: Brain and Behavior	nlx_144204	Blog	Resource:ScienceBlogs	http://scienceblogs.com/channel/brain-and-behavior/
Resource:ScienceBlogs: Life Science	nlx_144203	Blog	Resource:ScienceBlogs	http://scienceblogs.com/channel/life-science/
Resource:ScienceBlogs: Medicine and Health	nlx_144205	Blog	Resource:ScienceBlogs	http://scienceblogs.com/channel/medicine/
Resource:ScienceNOW	nlx_144226	Narrative resource	Resource:AAAS Resource:Science Magazine	http://news.sciencemag.org/sciencenow/
Resource:Scientific American Bering in Mind	nlx_144216	Blog	Resource:Scientific American	http://www.scientificamerican.com/section.cfm?id=bering-in-mind
Resource:Scientific American Cross-Check	nlx_144217	Blog	Resource:Scientific American	http://blogs.scientificamerican.com/cross-check/
Resource:Scientific American Guest Blog	nlx_144202	Blog	Resource:Scientific American	http://blogs.scientificamerican.com/guest-blog/
Resource:Scientific American Observations	nlx_144201	Blog	Resource:Scientific American	http://blogs.scientificamerican.com/observations/
Resource:SfN Brain Briefings	nif-0000-00437	Narrative resource	Resource:Society for Neuroscience	http://www.sfn.org/index.aspx?pagename=brainbriefings_main
Resource:Simtk.org	nif-0000-23302	Topical portal Software resource Data set Software repository	Resource:Simbios	https://simtk.org
Resource:SumsDB (Surface Management System Database) and WebCaret Online Visualization	nif-0000-00016	Atlas Database Data repository Data analysis service	Washington University School of Medicine in St. Louis; Missouri; USA	http://sumsdb.wustl.edu/sums/
Resource:Synapse Web	nif-0000-00026	Atlas Image collection Training material	University of Texas at Austin; Texas; USA	http://synapses.clm.utexas.edu
Resource:T3DB	nif-0000-22933	Database	University of Alberta; Alberta; Canada	http://t3db.org/
Resource:TAIR	nlx_61477	Database Data repository Data analysis service Experimental protocol	Carnegie Institution for Science	http://www.arabidopsis.org
Resource:Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat	nif-0000-24805	Database	Norwegian University of Science and Technology; Trondheim; Norway	http://www.temporal-lobe.com/
Resource:The Guardian: Science	nlx_144198	Blog Narrative resource	The Guardian	http://www.guardian.co.uk/science
Resource:The Guardian: Science Videos	nlx_144242	Video resource	Resource:The Guardian: Science	http://www.guardian.co.uk/science/science+content/video
Resource:The Guardian: Science Weekly	nlx_144241	Podcast	Resource:The Guardian: Science	http://www.guardian.co.uk/science/series/science
Resource:TheScienceJobs.com	nlx_144190	Job resource Meeting resource Workshop	University of Kerala; Kerala; India Resource:Tropical Botanic Garden and Research Institute	http://www.thesciencejobs.com/
Resource:This Week In Science	nlx_70738	Podcast		http://www.twis.org/
Resource:UCLA Multimodal Connectivity Database	nlx_83091	Data repository Data analysis service Database	Resource:Harvard/MGH-UCLA Consortium: Human Connectome Project	http://umcd.humanconnectomeproject.org/
Resource:UCSF Laboratory for Visual Neuroscience	nlx_143941	Laboratory portal Image Video resource	University of California at San Francisco; California; USA	http://vision.ucsf.edu/hortonlab/index.html
Resource:UniProtKB	nlx_53981	Database Data repository	Resource:UniProt	http://www.uniprot.org/help/uniprotkb
Resource:VMD	nlx_87328	Database Data analysis service	Virginia Polytechnic Institute and State University; Virginia; USA	http://vmd.vbi.vt.edu/
Resource:Visiome Platform	nif-0000-00048	Database Video resource Software repository Data repository Image collection	Resource:INCF Japan Node Resource:RIKEN Brain Science Institute	http://platform.visiome.neuroinf.jp/
Resource:WikiPathways	nif-0000-20925	Wiki	University of California at San Francisco; California; USA Maastricht University; Maastricht; Netherlands	http://wikipathways.org/
Resource:Wired Science	nlx_144196	Blog	Resource:WIRED.com	http://www.wired.com/wiredscience/
Resource:Wired Science Blogs	nlx_144197	Blog Narrative resource	Resource:Wired Science	http://www.wired.com/wiredscience/science-blogs/
Resource:WormBase	nif-0000-00053	Database Data repository Data analysis service Software resource	Wellcome Trust Sanger Institute; Hinxton; United Kingdom California Institute of Technology; California; USA Resource:Cold Spring Harbor Laboratory Washington University in St. Louis; Missouri; USA	http://www.wormbase.org
Resource:XNAT Central	nif-0000-04375	Database Image collection Data repository Image repository	Washington University School of Medicine in St. Louis; Missouri; USA	http://central.xnat.org
Resource:ZFIN	nif-0000-21427	Database Data repository Image collection	University of Oregon; Oregon; USA	http://zfin.org
Resource:Zebrafish International Resource Center	nif-0000-00242	Biomaterial supply resource Antibody supplier Biomaterial analysis service Organism supplier Material storage repository	University of Oregon; Oregon; USA	http://zebrafish.org
Resource:goCognitive	nlx_151647	Training material Video resource Assessment test provider Narrative resource Funding resource	University of Idaho; Idaho; USA	http://gocognitive.net/
Resource:jobs.ac.uk	nlx_144167	Job resource	University of Warwick; Coventry; United Kingdom	http://www.jobs.ac.uk/
Resource:neuroelectro	nlx_151885	Database	Carnegie Mellon University; Pennsylvania; USA	http://neuroelectro.org

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Aarnaud, Akash, Bandrow

Facts about Resource:NIF Data FederationRDF feed

Abbrev	Data Federation +
Address	Neuroscience Information Framework +, University of California +, San Diego +, 9500 Gilman Drive +, La Jolla +, and CA 92093-0446 +
Availability	Refer to individual databases +
CurationStatus	curated +
DefiningCitation	http://neuinfo.org/nif/nifgwt.html?query=*  +
Definition	The NIF Data Federation partners with the … The NIF Data Federation partners with the community to expose and simultaneously drill down into these individual databases and data sets and return relevant content. This type of content, part of the so called “hidden Web,” is typically not indexed by existing web search engines. Every record links back to the originating site. In order for NIF to directly query these independently maintained databases and datasets, database providers must register their database or dataset with the NIF Data Federation and specify permissions. Databases are concept mapped for ease of sharing and to allow better understanding of the results. Learn more about registering your resource, http://neuinfo.org/nif_components/disco/interoperation.shtm Search results are displayed under the Data Federation tab and are categorized by data type and nervous system level. In this way, users can easily step through the content of multiple resources, all from the same interface. Each federated resource individually displays their query results with links back to the relevant datasets within the host resource. This allows users to take advantage of additional views on the data and tools that are available through the host database. The NIF site provides tutorials for each resource, indicated by the "Professor Icon" professor icon showing users how to navigate the results page once directed there through the NIF. Additionally, query results may be exported as an Excel document. Note: NIF is not responsible for the availability or content of these external sites, nor does NIF endorse, warrant or guarantee the products, services or information described or offered at these external sites. NIF Integrated Databases: Theses NIF created "virtual" databases combine related data indexed from multiple databases and combine them into one view for easier browsing. NIF Integrated Animal View NIF Integrated Brain Gene Expression View NIF Integrated Disease View NIF Integrated Nervous System Connectivity View NIF Integrated Podcasts View NIF Integrated Software View NIF Integrated Video View NIF Integrated Jobs NIF Integrated Blogs For a listing of the Federated Databases see, http://neuinfo.org/mynif/databaseList.php or refer to the "Related To" NIF Data Federation below. he "Related To" NIF Data Federation below.
ExampleImage	+
Grant	Category:HHSN27120080035C +
Has default formThis property is a special property in this wiki.	Resource +
Has role	Portal +
Id	nlx_81822 +
Is part of	Resource:Neuroscience Information Framework +
Keywords	Semantics +, Neuroscience +, Animal +, Annotation +, Antibody +, Biospecimen +, Brain Activation Foci +, Clinical Trial +, Connectivity +, Dataset +, Disease +, Drug +, Grant +, Image +, Microarray +, Model +, Multimedia +, Negative Data +, Pathway +, People +, Plasmid +, Registry +, Software +, Brain Region +, Cell +, Gene +, Molecule +, Multi-Level +, Nervous System +, and Nervous System Function +
Label	Resource:NIF Data Federation +
ModifiedDate	22 October 2012 +
Page has default formThis property is a special property in this wiki.	Resource +
SuperCategory	Resource +
Supporting Agency	NIDA +, U.S. Department of Health and Human Services +, and Resource:NIH Blueprint for Neuroscience Research +
Synonym	Neuroscience Information Framework Data Federation +