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Resource:Affinity Databases for Protein-Ligand Complexes
| Name: | Resource:Affinity Databases for Protein-Ligand Complexes |
| Description: | A database that contains affinity data for protein-ligand complexes of the Protein Data Bank (PDB) in order to provide direct and free access to the experimental affinity of a given complex structure. As of Friday, April 22nd, 2011, AffinDB contains 748 affinity values covering 474 different PDB complexes. More than one affinity value may be associated with a single PDB complex, which is most frequently due to multiple references reporting affinity data for the same complex. Database users are encouraged to notify the administrators about any valuable publication which reports affinity data for PDB complexes.
Affinity data are exclusively obtained from the scientific literature. Both 'primary' and 'secondary' references are taken into account:
AffinDB provides access to data in three different forms: |
| Other Name(s): | AffinDB, AffinDB: Affinity Databases for Protein-Ligand Complexes |
| Parent Organization: | Philipps-University Marburg; Marburg; Germany |
| Related to: | Resource:Protein Data Bank Site |
| Resource Type(s): | Database |
| Keywords: | metabolic pathway, signaling pathway, protein-ligand complex, protein-protein interaction |
| Resource: | Resource |
| URL: | http://www.agklebe.de/affinity |
| PMID: | PMID 16381925 |
| Id: | nif-0000-02536 |
| Link to OWL / RDF: | Download this content as OWL/RDF |
Curation status: Curated
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| CurationStatus | uncurated + |
| DefiningCitation | http://www.agklebe.de/affinity + |
| Definition | A database that contains affinity data for … A database that contains affinity data for protein-ligand complexes of the Protein Data Bank (PDB) in order to provide direct and free access to the experimental affinity of a given complex structure. As of Friday, April 22nd, 2011, AffinDB contains 748 affinity values covering 474 different PDB complexes. More than one affinity value may be associated with a single PDB complex, which is most frequently due to multiple references reporting affinity data for the same complex. Database users are encouraged to notify the administrators about any valuable publication which reports affinity data for PDB complexes.
Affinity data are exclusively obtained from the scientific literature. Both 'primary' and 'secondary' references are taken into account:
AffinDB provides access to data in three different forms: III. Tabular reports |
| Has default formThis property is a special property in this wiki. | Resource + |
| Has role | Database + |
| Id | nif-0000-02536 + |
| Is part of | Philipps-University Marburg; Marburg; Germany + |
| Keywords | Metabolic pathway +, Signaling pathway +, Protein-ligand complex +, and Protein-protein interaction + |
| Label | Resource:Affinity Databases for Protein-Ligand Complexes + |
| ModifiedDate | 13 February 2013 + |
| PMID | 16381925 + |
| Page has default formThis property is a special property in this wiki. | Resource + |
| RelatedTo | Resource:Protein Data Bank Site + |
| SuperCategory | Resource + |
| Synonym | AffinDB +, and AffinDB: Affinity Databases for Protein-Ligand Complexes + |