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Resource:Bioinformatics Links Directory

Name: Resource:Bioinformatics Links Directory
Description: Database of curated links to molecular resources, tools and databases selected on the basis of recommendations from bioinformatics experts in the field. This resource relies on input from its community of bioinformatics users for suggestions. Starting in 2003, it has also started listing all links contained in the NAR Webserver issue.

The different types of information available in this portal:

  • Computer Related: This category contains links to resources relating to programming languages often used in bioinformatics. Other tools of the trade, such as web development and database resources, are also included here.
  • Sequence Comparison: Tools and resources for the comparison of sequences including sequence similarity searching, alignment tools, and general comparative genomics resources.
  • DNA: This category contains links to useful resources for DNA sequence analyses such as tools for comparative sequence analysis and sequence assembly. Links to programs for sequence manipulation, primer design, and sequence retrieval and submission are also listed here.
  • Education: Links to information about the techniques, materials, people, places, and events of the greater bioinformatics community. Included are current news headlines, literature sources, educational material and links to bioinformatics courses and workshops.
  • Expression: Links to tools for predicting the expression, alternative splicing, and regulation of a gene sequence are found here. This section also contains links to databases, methods, and analysis tools for protein expression, SAGE, EST, and microarray data.
  • Human Genome: This section contains links to draft annotations of the human genome in addition to resources for sequence polymorphisms and genomics. Also included are links related to ethical discussions surrounding the study of the human genome.
  • Literature: Links to resources related to published literature, including tools to search for articles and through literature abstracts. Additional text mining resources, open access resources, and literature goldmines are also listed.
  • Model Organisms: Included in this category are links to resources for various model organisms ranging from mammals to microbes. These include databases and tools for genome scale analyses.
  • Other Molecules: Bioinformatics tools related to molecules other than DNA, RNA, and protein. This category will include resources for the bioinformatics of small molecules as well as for other biopolymers including carbohydrates and metabolites.
  • Protein: This category contains links to useful resources for protein sequence and structure analyses. Resources for phylogenetic analyses, prediction of protein features, and analyses of interactions are also found here.
  • RNA: Resources include links to sequence retrieval programs, structure prediction and visualization tools, motif search programs, and information on various functional RNAs.
Other Name(s): Bioinformatics.ca Links Directory, Canadian Bioinformatics.ca Links Directory
Abbreviation: Bioinformatics Links Directory
Parent Organization: Resource:Ontario Institute for Cancer Research
Resource Type(s): Database
Resource: Resource
URL: http://bioinformatics.ca/links_directory/
*Id: nif-0000-10170
PMID: PMID 20542914, 19528072, 18586831, 17586821, 16845014, 15980476,
Related to: Resource:FORCE11, Resource:3DVC
Availability: Unless otherwise noted, Creative Commons Attribution-ShareAlike License, 2.5, The community can contribute to this resource
Address: Ontario Institute for Cancer Research 100 College St., Suite 800 Toronto, Ontario, M5G 0A3 Phone: (416) 673-8502 Fax: (416) 977-7446 Email: links{at}bioinformatics{dot}ca
Keywords: genomics, registry, aggregator, Bioinformatics, techniques, human genome, model organism, education
Link to OWL / RDF: Download this content as OWL/RDF

Categories related to Resource:Bioinformatics Links Directory

Resource:bioDBcore

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Facts about Resource:Bioinformatics Links DirectoryRDF feed
AbbrevBioinformatics Links Directory  +
AddressOntario Institute for Cancer Research 100 College St.  +, Suite 800 Toronto  +, Ontario  +, and M5G 0A3 Phone: (416) 673-8502 Fax: (416) 977-7446 Email: links{at}bioinformatics{dot}ca  +
AvailabilityUnless otherwise noted  +, Creative Commons Attribution-ShareAlike License  +, 2.5  +, and The community can contribute to this resource  +
CurationStatusuncurated  +
DefiningCitationhttp://bioinformatics.ca/links_directory/  +
DefinitionDatabase of curated links to molecular res Database of curated links to molecular resources, tools and databases selected on the basis of recommendations from bioinformatics experts in the field. This resource relies on input from its community of bioinformatics users for suggestions. Starting in 2003, it has also started listing all links contained in the NAR Webserver issue.

The different types of information available in this portal:

  • Computer Related: This category contains links to resources relating to programming languages often used in bioinformatics. Other tools of the trade, such as web development and database resources, are also included here.
  • Sequence Comparison: Tools and resources for the comparison of sequences including sequence similarity searching, alignment tools, and general comparative genomics resources.
  • DNA: This category contains links to useful resources for DNA sequence analyses such as tools for comparative sequence analysis and sequence assembly. Links to programs for sequence manipulation, primer design, and sequence retrieval and submission are also listed here.
  • Education: Links to information about the techniques, materials, people, places, and events of the greater bioinformatics community. Included are current news headlines, literature sources, educational material and links to bioinformatics courses and workshops.
  • Expression: Links to tools for predicting the expression, alternative splicing, and regulation of a gene sequence are found here. This section also contains links to databases, methods, and analysis tools for protein expression, SAGE, EST, and microarray data.
  • Human Genome: This section contains links to draft annotations of the human genome in addition to resources for sequence polymorphisms and genomics. Also included are links related to ethical discussions surrounding the study of the human genome.
  • Literature: Links to resources related to published literature, including tools to search for articles and through literature abstracts. Additional text mining resources, open access resources, and literature goldmines are also listed.
  • Model Organisms: Included in this category are links to resources for various model organisms ranging from mammals to microbes. These include databases and tools for genome scale analyses.
  • Other Molecules: Bioinformatics tools related to molecules other than DNA, RNA, and protein. This category will include resources for the bioinformatics of small molecules as well as for other biopolymers including carbohydrates and metabolites.
  • Protein: This category contains links to useful resources for protein sequence and structure analyses. Resources for phylogenetic analyses, prediction of protein features, and analyses of interactions are also found here.
  • RNA: Resources include links to sequence retrieval programs, structure prediction and visualization tools, motif search programs, and information on various functional RNAs. nd information on various functional RNAs.
ExampleImageBioinformatics Links Directory.PNG  +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-10170  +
Is part ofResource:Ontario Institute for Cancer Research  +
KeywordsGenomics  +, Registry  +, Aggregator  +, Bioinformatics  +, Techniques  +, Human genome  +, Model organism  +, and Education  +
LabelResource:Bioinformatics Links Directory  +
ModifiedDate29 June 2013  +
PMID20542914, 19528072, 18586831, 17586821, 16845014, 15980476,  +
Page has default formThis property is a special property in this wiki.Resource  +
RelatedToResource:FORCE11  +, and Resource:3DVC  +
SuperCategoryResource  +
SynonymBioinformatics.ca Links Directory  +, and Canadian Bioinformatics.ca Links Directory  +
Twitterbiolinksdir  +