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Resource:CLASSIFI - Cluster Assignment for Biological Inference

Name: Resource:CLASSIFI - Cluster Assignment for Biological Inference
Description: THIS RESOURCE IS NO LONGER IN SERVICE

Cluster Assignment for Biological Inference (CLASSIFI) is a data-mining tool that can be used to identify significant co-clustering of genes with similar functional properties (e.g. cellular response to DNA damage). Briefly, CLASSIFI uses the Gene Ontology gene annotation scheme to define the functional properties of all genes/probes in a microarray data set, and then applies a cumulative hypergeometric distribution analysis to determine if any statistically significant gene ontology co-clustering has occurred.

Platform: Online tool
Other Name(s): Cluster Assignment for Biological Inference (CLASSIFI), Cluster Assignment for Biological Inference
Parent Organization: Resource:UT Southwestern Medical Center Department of Pathology
Related to: Resource:Gene Ontology Tools, Resource:GO
Resource Type(s): Data analysis service
Keywords: Statistical analysis, Gene, Gene expression, Data mining, Biological process, Function, Gene Ontology, Annotation, Microarray
Abbreviation: CLASSIFI
Resource: Resource
URL: http://www.utsouthwestern.edu/education/medical-school/departments/pathology/pathdb/classifi.html
PMID: PMID 16670020
Availability: Free for academic use
Id: nlx_149214
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Uncurated

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Notes

This page uses this default form:Resource

Contributors

Aarnaud, Akash, Ccdbuser



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Facts about Resource:CLASSIFI - Cluster Assignment for Biological InferenceRDF feed
AbbrevCLASSIFI  +
AvailabilityFree for academic use  +
CurationStatuscurated  +
DefiningCitationhttp://www.utsouthwestern.edu/education/medical-school/departments/pathology/pathdb/classifi.html  +
DefinitionTHIS RESOURCE IS NO LONGER IN SERVICE

Clu THIS RESOURCE IS NO LONGER IN SERVICE

Cluster Assignment for Biological Inference (CLASSIFI) is a data-mining tool that can be used to identify significant co-clustering of genes with similar functional properties (e.g. cellular response to DNA damage). Briefly, CLASSIFI uses the Gene Ontology gene annotation scheme to define the functional properties of all genes/probes in a microarray data set, and then applies a cumulative hypergeometric distribution analysis to determine if any statistically significant gene ontology co-clustering has occurred.

Platform: Online tool ering has occurred.

Platform: Online tool
Has default formThis property is a special property in this wiki.Resource  +
Has roleData analysis service  +
Idnlx_149214  +
Is part ofResource:UT Southwestern Medical Center Department of Pathology  +
KeywordsStatistical analysis  +, Gene  +, Gene expression  +, Data mining  +, Biological process  +, Function  +, Gene Ontology  +, Annotation  +, and Microarray  +
LabelResource:CLASSIFI - Cluster Assignment for Biological Inference  +
ModifiedDate20 July 2012  +
PMID16670020  +
Page has default formThis property is a special property in this wiki.Resource  +
RelatedToResource:Gene Ontology Tools  +, and Resource:GO  +
SuperCategoryResource  +
SynonymCluster Assignment for Biological Inference (CLASSIFI)  +, and Cluster Assignment for Biological Inference  +