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Resource:CR-EST - Crop ESTs

Name: Resource:CR-EST - Crop ESTs
Description:

The Crop EST Database (CR-EST) is a public available online resource providing access to sequence, classification, clustering, and annotation data of crop EST projects at the IPK. Summarized numbers about genomic data of species are listed in tables.
The main database content is original sequence data and cDNA library information from different organisms as well as results from BlastX searches against major protein sequence databases contained in NRPEP. Additionally sequence alignments of stackPACK clustering projects are available.

This web application allows to BLAST against CR-EST ESTs and to query and retrieve data from Gene Ontology and metabolic pathway annotations as well as sequence similarities from stored results of BLASTX searches against the NRPEP database. CR-EST also features interactive JAVA-based tools, such as open reading frame visualization and explorative analysis of Gene Ontology mappings to ESTs.
Other Name(s): Crop EST
Resource Type(s): database
Resource: Resource
URL: http://pgrc.ipk-gatersleben.de/cr-est
*Id: nif-0000-02695
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Curated

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Contributors

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Facts about Resource:CR-EST - Crop ESTsRDF feed
CurationStatusuncurated  +
DefiningCitationhttp://pgrc.ipk-gatersleben.de/cr-est  +
Definition

The Crop EST Database (CR-EST) is
The Crop EST Database (CR-EST) is a public available online resource providing access to sequence, classification, clustering, and annotation data of crop EST projects at the IPK. Summarized numbers about genomic data of species are listed in tables.
The main database content is original sequence data and cDNA library information from different organisms as well as results from BlastX searches against major protein sequence databases contained in NRPEP. Additionally sequence alignments of stackPACK clustering projects are available.

This web application allows to BLAST against CR-EST ESTs and to query and retrieve data from Gene Ontology and metabolic pathway annotations as well as sequence similarities from stored results of BLASTX searches against the NRPEP database. CR-EST also features interactive JAVA-based tools, such as open reading frame visualization and explorative analysis of Gene Ontology mappings to ESTs.
s of Gene Ontology mappings to ESTs.
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-02695  +
LabelResource:CR-EST - Crop ESTs  +
ModifiedDate12 October 2010  +
SuperCategoryResource  +
SynonymCrop EST  +