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Resource:Consensus CDS

Name: Resource:Consensus CDS
Description: Database (anonymous FTP) resulting from a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support convergence towards a standard set of gene annotations. Collaborators are EBI, NCBI, UCSC, WTSI and the initial results are also available from the participants' genome browser Web sites. In addition, CCDS identifiers are indicated on the relevant NCBI RefSeq and Entrez Gene records and in Map Viewer displays of RNA (RefSeq) and Gene annotations on the reference assembly.
Other Name(s): NCBI Consensus CDS protein set, CCDS Database, NCBI CCDS Database
Abbreviation: CCDS
Parent Organization: Resource:NCBI, Resource:European Bioinformatics Institute, Wellcome Trust Sanger Institute; Hinxton; United Kingdom, University of California at Santa Cruz; California; USA
Resource Type(s): Database
Resource: Resource
URL: http://www.ncbi.nlm.nih.gov/CCDS/
*Id: nif-0000-02645
PMID: PMID 24217909, 22434842, 19498102
Related to: Resource:OMICtools, Resource:NCBI Gene, Resource:HomoloGene, Resource:MapViewer, Resource:VEGA
Availability: The community can contribute to this resource, Acknowledgement requested
Keywords: human genome sequence, human protein, mouse genome sequence, mouse protein, Gold standard or authority, protein coding region, gene, genome sequence, genome, sequence, gene annotation, protein
Organism: Human, Mouse
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Uncurated

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Notes

This page uses this default form:Resource

Xref: OMICS_01535

Alt. URL: http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi



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*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.

Facts about Resource:Consensus CDSRDF feed
AbbrevCCDS  +
AvailabilityThe community can contribute to this resource  +, and Acknowledgement requested  +
CurationStatuscurated  +
DefiningCitationhttp://www.ncbi.nlm.nih.gov/CCDS/  +
DefinitionDatabase (anonymous FTP) resulting from a Database (anonymous FTP) resulting from a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support convergence towards a standard set of gene annotations. Collaborators are EBI, NCBI, UCSC, WTSI and the initial results are also available from the participants' genome browser Web sites. In addition, CCDS identifiers are indicated on the relevant NCBI RefSeq and Entrez Gene records and in Map Viewer displays of RNA (RefSeq) and Gene annotations on the reference assembly. ene annotations on the reference assembly.
ExampleImageCCDS.PNG  +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-02645  +
Is part ofResource:NCBI  +, Resource:European Bioinformatics Institute  +, Wellcome Trust Sanger Institute; Hinxton; United Kingdom  +, and University of California at Santa Cruz; California; USA  +
KeywordsHuman genome sequence  +, Human protein  +, Mouse genome sequence  +, Mouse protein  +, Gold standard or authority  +, Protein coding region  +, Gene  +, Genome sequence  +, Genome  +, Sequence  +, Gene annotation  +, and Protein  +
LabelResource:Consensus CDS  +
ModifiedDate14 March 2014  +
PMID24217909, 22434842, 19498102  +
Page has default formThis property is a special property in this wiki.Resource  +
RelatedToResource:OMICtools  +, Resource:NCBI Gene  +, Resource:HomoloGene  +, Resource:MapViewer  +, and Resource:VEGA  +
SpeciesHuman  +, and Mouse  +
SuperCategoryResource  +
SynonymNCBI Consensus CDS protein set  +, CCDS Database  +, and NCBI CCDS Database  +