Resource:Gene Interaction Extraction from the Literature
|Name:||Resource:Gene Interaction Extraction from the Literature|
GIN-IE is a high precision system for extracting protein/gene interactions, interaction cue words, and directionality from the literature. Syntax-aware inferences about the roles of the entities are made by using the syntactic and dependency parse tree structures of the sentences. Negation and speculation are frequently occurring language phenomena that modify the factuality of the information contained in text. GIN-IE detects and distinguishes interactions that are extracted from negated or speculative sentences. GIN-IE has been integrated with the NCIBI PubMed daily update and processing pipeline. The extracted interactions are accessible through MimiWeb.
|Parent Organization:||National Center for Integrative Biomedical Informatics; National Institutes of Health|
|Keywords:||extract, gene, interaction, protein, sentence, structure|
|Link to OWL / RDF:||Download this content as OWL/RDF|
Curation status: Curated
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*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.
|Comment||<?xml version="1.0" encoding= … <?xml version="1.0" encoding="UTF-8"?>|
<disco xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" format="discoToNifRegistry.xsd" version="1.0" version-date="2009-07-30">
GIN-IE is a high precision system …
ions are accessible through MimiWeb.
|Has default formThis property is a special property in this wiki.||Resource +|
|Has role||Software +|
|Is part of||National Center for Integrative Biomedical Informatics; National Institutes of Health +|
|Keywords||Extract +, Gene +, Interaction +, Protein +, Sentence +, and Structure +|
|Label||Resource:Gene Interaction Extraction from the Literature +|
|ModifiedDate||14 October 2010 +|