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Resource:Gene Ontology Tools

Name: Resource:Gene Ontology Tools
Description: Collection of tools developed by the GO Consortium and by third parties. Tools are listed by category (see tables below) or alphabetically and continue to be improved and expanded. Submit your GO Tool, http://www.geneontology.org/cgi-bin/add-tool.cgi. For adding resources to this registry through the NeuroLex, http://neurolex.org/wiki/Main_Page, please refer to https://confluence.crbs.ucsd.edu/display/NIF/Resources+and+Curation#ResourcesandCuration-IncorporatingOutsideRegistriesandAccommodatingTheirTags.

You can receive support in using these tools by writing to the GO helpdesk, http://www.geneontology.org/GO.contacts.shtml

Categories include:

  • Ontology or annotation browser
  • Ontology or annotation search engine
  • Ontology or annotation visualization
  • Ontology or annotation editor
  • Database or data warehouse
  • Software library
  • Statistical analysis
  • Slimmer-type tool
  • Term enrichment
  • Text mining
  • Protein interactions
  • Functional similarity
  • Semantic similarity
  • Other analysis

The tools listings are currently being updated to provide users with more information. Please fill out the GO tool submission form if you would like your tool to be displayed in the tools collection on the GO website.

A list of useful ID mapping tools is also maintained on the GO wiki.
Abbreviation: GO Tools
Parent Organization: Resource:GO
Resource Type(s): Software repository, Catalog
Resource: Resource
URL: http://www.geneontology.org/GO.tools.shtml
Alt. URL(s): https://neuinfo.org/mynif/search.php?q=*&t=indexable&nif=nlx_146273-1
*Id: nlx_146273
Listed By: Resource:NIF Data Federation
Availability: The community can contribute to this resource, Acknowledgement required, Free, Public
Keywords: Registry, annotation browser, annotation search engine, annotation visualization, Ontology, annotation editor, Database, data warehouse, Software library, Statistical analysis, Slimmer-type tool, Term enrichment, Text mining, Protein interaction, Functional similarity, Semantic similarity, analysis, annotation, visualization, editor
Link to OWL / RDF: Download this content as OWL/RDF

Categories related to Resource:Gene Ontology Tools

TestGeneOntologyPreload

Curation status: Curated

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Notes

This page uses this default form:Resource

Download All GO Tools

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Download Ontology or annotation browser Tools

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Ontology or annotation browser: Table View

Download Ontology or annotation search engine Tools

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Ontology or annotation search engine: Table View

Download Ontology or annotation visualization Tools

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Ontology or annotation visualization: Table View

Download Ontology or annotation editor Tools

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Ontology or annotation editor: Table View

Download Database or data warehouse Tools

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Database or data warehouse: Table View

Download Software library Tools

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Software library: Table View

Download Statistical analysis Tools

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Statistical analysis: Table View

Download Slimmer-type Tools

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Slimmer-type tool: Table View

Download Term enrichment Tools

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Term enrichment: Table View

Download Text mining Tools

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Text mining: Table View

Download Protein interaction Tools

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Protein interactions: Table View

Download Functional similarity Tools

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Functional similarity: Table View

Download Semantic similarity Tools

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Semantic similarity: Table View

Download Other analysis Tools

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Other analysis: Table View

Contributors

Aarnaud, Akash, Bandrow, Ccdbuser



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*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.

Facts about Resource:Gene Ontology ToolsRDF feed
AbbrevGO Tools  +
AltURLhttps://neuinfo.org/mynif/search.php?q=%2A&t=indexable&nif=nlx_146273-1  +
AvailabilityThe community can contribute to this resource  +, Acknowledgement required  +, Free  +, and Public  +
CurationStatuscurated  +
DefiningCitationhttp://www.geneontology.org/GO.tools.shtml  +
DefinitionCollection of tools developed by the GO Co Collection of tools developed by the GO Consortium and by third parties. Tools are listed by category (see tables below) or alphabetically and continue to be improved and expanded. Submit your GO Tool, http://www.geneontology.org/cgi-bin/add-tool.cgi. For adding resources to this registry through the NeuroLex, http://neurolex.org/wiki/Main_Page, please refer to https://confluence.crbs.ucsd.edu/display/NIF/Resources+and+Curation#ResourcesandCuration-IncorporatingOutsideRegistriesandAccommodatingTheirTags.

You can receive support in using these tools by writing to the GO helpdesk, http://www.geneontology.org/GO.contacts.shtml

Categories include:

  • Ontology or annotation browser
  • Ontology or annotation search engine
  • Ontology or annotation visualization
  • Ontology or annotation editor
  • Database or data warehouse
  • Software library
  • Statistical analysis
  • Slimmer-type tool
  • Term enrichment
  • Text mining
  • Protein interactions
  • Functional similarity
  • Semantic similarity
  • Other analysis

The tools listings are currently being updated to provide users with more information. Please fill out the GO tool submission form if you would like your tool to be displayed in the tools collection on the GO website.

A list of useful ID mapping tools is also maintained on the GO wiki.
g tools is also maintained on the GO wiki.
ExampleImageGO Tools.PNG  +
Has default formThis property is a special property in this wiki.Resource  +
Has roleSoftware repository  +, and Catalog  +
Idnlx_146273  +
Is part ofResource:GO  +
KeywordsCatalog  +, Annotation browser  +, Annotation search engine  +, Annotation visualization  +, Ontology  +, Annotation editor  +, Database  +, Data warehouse  +, Software library  +, Statistical analysis  +, Slimmer-type tool  +, Term enrichment  +, Text mining  +, Protein interaction  +, Functional similarity  +, Semantic similarity  +, Analysis  +, Annotation  +, Visualization  +, and Editor  +
LabelResource:Gene Ontology Tools  +
ListedbyResource:NIF Data Federation  +
ModifiedDate3 September 2014  +
Page has default formThis property is a special property in this wiki.Resource  +
SuperCategoryResource  +