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Resource:HomoloGene

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Name:	Resource:HomoloGene
Description:	HomoloGene is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes. We have recently adopted a new build procedure that makes use of amino acid sequence searching (blastp) to find more distant relationships, but the procedure still refers to the DNA sequence for computation of some of the statistics. The matching strategy is guided by the taxonomic tree such that more closely related organisms are compared first. Moreover, HomoloGene entries now include paralogs in addition to orthologs.
Parent Organization:	Resource:National Center for Biotechnology Information
Related to:	NIF Data Federation
Resource Type(s):	Web accessible database, Downloadable database, Service resource
Keywords:	eukaryotic genome, homolog, Human, Danio rerio, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, Pan troglodytes, Dog, Bos taurus, Mouse, Rat, Chicken, Anopheles gambiae, Schizosaccharomyces pombe, Saccharomyces cerevisiae, Kluyveromyces lactis, Eremothecium gossypii, Magnaporthe grisea, Neurospora crassa, Oryza sativa, Plasmodium falciparum, Paralog, Ortholog, Gold standard or authority
Abbreviation:	HomoloGene
Resource:	Resource
URL:	http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=homologene
Id:	nif-0000-02975
Link to OWL / RDF:	Download this content as OWL/RDF

Last modified date:	2012-4-19
Version number:	173521
Example image:
Curation status	curated

Curation status: Curated

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Notes

This page uses this default form:Resource

Facts about Resource:HomoloGeneRDF feed

Abbrev	HomoloGene  +
CurationStatus	curated  +
DefiningCitation	http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=homologene  +
Definition	HomoloGene is a system for automated detec … HomoloGene is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes. We have recently adopted a new build procedure that makes use of amino acid sequence searching (blastp) to find more distant relationships, but the procedure still refers to the DNA sequence for computation of some of the statistics. The matching strategy is guided by the taxonomic tree such that more closely related organisms are compared first. Moreover, HomoloGene entries now include paralogs in addition to orthologs. e paralogs in addition to orthologs.
ExampleImage	+
Has default formThis property is a special property in this wiki.	Resource  +
Has role	Web accessible database  +, Downloadable database  +, and Service resource  +
Id	nif-0000-02975  +
Is part of	Resource:National Center for Biotechnology Information  +
Keywords	Eukaryotic genome  +, Homolog  +, Human  +, Danio rerio  +, Drosophila melanogaster  +, Caenorhabditis elegans  +, Arabidopsis thaliana  +, Pan troglodytes  +, Dog  +, Bos taurus  +, Mouse  +, Rat  +, Chicken  +, Anopheles gambiae  +, Schizosaccharomyces pombe  +, Saccharomyces cerevisiae  +, Kluyveromyces lactis  +, Eremothecium gossypii  +, Magnaporthe grisea  +, Neurospora crassa  +, Oryza sativa  +, Plasmodium falciparum  +, Paralog  +, Ortholog  +, and Gold standard or authority  +
Label	Resource:HomoloGene  +
ModifiedDate	19 April 2012  +
Page has default formThis property is a special property in this wiki.	Resource  +
RelatedTo	NIF Data Federation  +