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Resource:IMGT/GENE-DB

Name: Resource:IMGT/GENE-DB
Description: IMGT/GENE-DB is the comprehensive IMGT genome database for immunoglobulin (IG) and T cell receptor (TR) genes from human and mouse, and, in development, from other vertebrates. IMGT/GENE-DB is the international reference for the IG and TR gene nomenclature and works in close collaboration with the HUGO Nomenclature Committee, Mouse Genome Database and genome committees for other species.


IMGT/GENE-DB allows a search of IG and TR genes by locus, group and subgroup, which are CLASSIFICATION concepts of IMGT-ONTOLOGY. Short cuts allow the retrieval gene information by gene name or clone name. Direct links with configurable URL give access to information usable by humans or programs. An IMGT/GENE-DB entry displays accurate gene data related to genome (gene localization), allelic polymorphisms (number of alleles, IMGT reference sequences, functionality, etc.) gene expression (known cDNAs), proteins and structures (Protein displays, IMGT Colliers de Perles). It provides internal links to the IMGT sequence databases and to the IMGT Repertoire Web resources, and external links to genome and generalist sequence databases. IMGT/GENE-DB manages the IMGT reference directory used by the IMGT tools for IG and TR gene and allele comparison and assignment, and by the IMGT databases for gene data annotation.
Abbreviation: IMGT/GENE-DB
Parent Organization: Resource:IMGT - the international ImMunoGeneTics information system
Supporting Agency: European Union, (5th PCRDT programme), Centre National de la Recherche Scientifique, Ministere de l'Education Nationale, de l'Enseignement Superieur et de la Recherche (Universite Montpellier II Plan-Pluri-Formation)
Grant: QLG2-2000-01287, BIOSTIC-LR2004, ACI-IMPBIO IMP82-2004
Resource Type(s): Database, International standard specification
Resource: Resource
URL: http://imgt.cines.fr/cgi-bin/GENElect.jv
*Id: nif-0000-03012
PMID: PMID 15608191
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Curated

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Notes

This page uses this default form:Resource

Old url: http://imgt.cines.fr



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*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.

Facts about Resource:IMGT/GENE-DBRDF feed
AbbrevIMGT/GENE-DB  +
CurationStatuscurated  +
DefiningCitationhttp://www.imgt.org/IMGTindex/IMGTgene-db.html  +
DefinitionIMGT/GENE-DB is the comprehensive IMGT gen IMGT/GENE-DB is the comprehensive IMGT genome database for immunoglobulin (IG) and T cell receptor (TR) genes from human and mouse, and, in development, from other vertebrates. IMGT/GENE-DB is the international reference for the IG and TR gene nomenclature and works in close collaboration with the HUGO Nomenclature Committee, Mouse Genome Database and genome committees for other species.


IMGT/GENE-DB allows a search of IG and TR genes by locus, group and subgroup, which are CLASSIFICATION concepts of IMGT-ONTOLOGY. Short cuts allow the retrieval gene information by gene name or clone name. Direct links with configurable URL give access to information usable by humans or programs. An IMGT/GENE-DB entry displays accurate gene data related to genome (gene localization), allelic polymorphisms (number of alleles, IMGT reference sequences, functionality, etc.) gene expression (known cDNAs), proteins and structures (Protein displays, IMGT Colliers de Perles). It provides internal links to the IMGT sequence databases and to the IMGT Repertoire Web resources, and external links to genome and generalist sequence databases. IMGT/GENE-DB manages the IMGT reference directory used by the IMGT tools for IG and TR gene and allele comparison and assignment, and by the IMGT databases for gene data annotation.
e IMGT databases for gene data annotation.
ExampleImageIMGT GENE-DB.PNG  +
GrantCategory:QLG2-2000-01287   +, Category:BIOSTIC-LR2004   +, and Category:ACI-IMPBIO IMP82-2004   +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +, and International standard specification  +
Idnif-0000-03012  +
Is part ofResource:IMGT - the international ImMunoGeneTics information system  +
LabelResource:IMGT/GENE-DB  +
ModifiedDate25 July 2014  +
OldURLhttp://imgt.cines.fr  +, and http://imgt.cines.fr/cgi-bin/GENElect.jv  +
PMID15608191  +
Page has default formThis property is a special property in this wiki.Resource  +
SuperCategoryResource  +
Supporting AgencyEuropean Union  +, (5th PCRDT programme)  +, French National Center for Scientific Research  +, Ministere de l'Education Nationale  +, and De l'Enseignement Superieur et de la Recherche (Universite Montpellier II Plan-Pluri-Formation)  +