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Resource:JGI Genome Portal

Name: Resource:JGI Genome Portal
Description: Portal providing unified access to all JGI genomic databases and analytical tools. A user can find all DOE JGI sequencing projects and their status, search for and download assemblies and annotations of sequenced genomes, and interactively explore those genomes and compare them with other sequenced microbes, fungi, plants or metagenomes using specialized systems tailored to each particular class of organisms. The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web.[1]
Other Name(s): Genome Portal of the Department of Energy Joint Genome Institute, Joint Genome Institute Genome Portal
Abbreviation: JGI Genome Portal
Parent Organization: Resource:DOE Joint Genome Institute
Supporting Agency: DOE
Grant: Contract No. DE-AC02-05CH11231
Resource Type(s): Database
Resource: Resource
URL: http://genome.jgi.doe.gov/
Id: nif-0000-21230
PMID: PMID 24225321, 22110030
Publication link: http://nar.oxfordjournals.org/content/40/D1/D26.long
Related to: Resource:OMICtools
Address: Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA
Keywords: gene, computation, genome, genomics, model organism, assembly, annotation, sequenced genome, Metagenome
Organism: Archaea, Eukaryota, Bacteria, Proteobacteria
Link to OWL / RDF: Download this content as OWL/RDF

Parts of Resource:JGI Genome Portal

Curation status: Uncurated

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References

  1. Grigoriev IV et al. (2012) The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res 40: D26-32 PubMed

Notes

This page uses this default form:Resource

Xref: OMICS_01654

Alt. URL: http://genome.jgi-psf.org/

Contributors

Aarnaud, Ccdbuser, Zaidaziz



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Facts about Resource:JGI Genome PortalRDF feed
AbbrevJGI Genome Portal  +
AddressDepartment of Energy Joint Genome Institute  +, 2800 Mitchell Drive  +, Walnut Creek  +, and USA  +
CurationStatuscurated  +
DefiningCitationhttp://genome.jgi.doe.gov/  +
DefinitionPortal providing unified access to all JGI Portal providing unified access to all JGI genomic databases and analytical tools. A user can find all DOE JGI sequencing projects and their status, search for and download assemblies and annotations of sequenced genomes, and interactively explore those genomes and compare them with other sequenced microbes, fungi, plants or metagenomes using specialized systems tailored to each particular class of organisms. The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web. e data in different contexts over the web.
GrantCategory:Contract No. DE-AC02-05CH11231   +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-21230  +
Is part ofResource:DOE Joint Genome Institute  +
KeywordsGene  +, Computation  +, Genome  +, Genomics  +, Model organism  +, Assembly  +, Annotation  +, Sequenced genome  +, and Metagenome  +
LabelResource:JGI Genome Portal  +
ModifiedDate14 January 2014  +
PMID24225321, 22110030  +
Page has default formThis property is a special property in this wiki.Resource  +
PublicationLinkhttp://nar.oxfordjournals.org/content/40/D1/D26.long  +
RelatedToResource:OMICtools  +
SpeciesArchaea  +, Eukaryota  +, Bacteria  +, and Proteobacteria  +
SuperCategoryResource  +
Supporting AgencyDOE  +
SynonymGenome Portal of the Department of Energy Joint Genome Institute  +, and Joint Genome Institute Genome Portal  +