EditFrom NeuroLex
Resource:LONI Pipeline Processing Environment
| Name: | Resource:LONI Pipeline Processing Environment |
| Description: | The LONI Pipeline is a free workflow application primarily aimed at neuroimaging researchers that allows users to easily describe their executables in a graphical user interface (ie. create a module) and connect them together to create complex analyses all without having to code a single line in a scripting language. Instead of manually managing intermediate data in a script, the LONI Pipeline handles the passing of data between programs for you. With the LONI Pipeline users can quickly create workflows that take advantage of all the greatest neuroimaging tools available.
Once you’ve created a module for use in the LONI Pipeline, you can save it into your personal library and reuse it in other workflows you create by simply dragging and dropping it in. Because the LONI Pipeline is written in Java, you can work in whatever operating system suits you best. If there are tools that you need that can only work on another operating system, you can install a Pipeline server on that computer and connect from your client to do processing and analysis remotely. |
| Parent Organization: | David Geffen School of Medicine at UCLA; California; USA, Resource:UCLA: Laboratory of Neuro Imaging |
| Supporting Agency: | NIH |
| Resource Type(s): | Software application |
| Keywords: | Workflow, Neuroscience |
| Grant: | P41 RR013642, R01 MH71940, U54 RR021813 |
| Abbreviation: | LONI Pipeline |
| Resource: | Resource |
| URL: | http://pipeline.loni.ucla.edu |
| PMID: | PMID 12880830 |
| Id: | nif-0000-00322 |
| Link to OWL / RDF: | Download this content as OWL/RDF |
Curation status: Curated
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Facts about Resource:LONI Pipeline Processing EnvironmentRDF feed
| Abbrev | LONI Pipeline + |
| Comment | <?xml version="1.0" encoding="UTF-8"?&g … <?xml version="1.0" encoding="UTF-8"?> <disco xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" format="discoToNifRegistry.xsd" version="1.0" version-date="2009-07-30"> :<resource blueprint="true" disco_id="191" full_name="A visual analysis envrionment for neuroimaging. Modularizes command-line programs and allows client/server execution of analyses in a platform independent scheme. Analyses may be saved, re-run on new datasets, and easily modified to accomodate new concepts or small changes. Analyses and programs may be distributed via Pipeline Servers that are application and cycle serving environments." last-discoed="2009-08-29" nif_id="new" short_name="LONI Pipeline Processing Environment" url="http://www.loni.ucla.edu/NCRR/Software/Pipeline.html"> :<admin_contact email="" name="Arthur Toga" phone="" /> :<comment type="desc:Version_Information" /> :<comment type="desc:version_information" /> :<comment type="desc:keywords">atlas, BIRN, CCB (NCBC), functional, NA-MIC (NCBC), registration, segmentation, statistical, surface analysis, visual processing environment, volume, warping</comment> :<keyword type="license" value="none for educational/research use" /> :<keyword type="release_date" value="Nov 15/ 2002" /> :<keyword type="version" value="1.0.3" /> :</resource> </disco> <?xml version="1.0" encoding="UTF-8"?> <disco xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" format="discoToNifRegistry.xsd" version="1.0" version-date="2009-07-30"> :<resource blueprint="true" disco_id="70" full_name="Protocol Execution Environment" last-discoed="2009-08-29" nif_id="new" short_name="LONI Pipeline Processing Environment" url="http://pipeline.loni.ucla.edu"> :<parent_organization full_name="UCLA Center for Computational Biology" /> :<admin_contact email="" name="Arash Payan, Jagadeeswaran Rajendiran, Arthur Toga" phone="" /> :<comment type="desc:development_stage">Beta</comment> :<comment type="desc:Version_Information" /> :<comment type="desc:version_information" /> :<comment type="desc:keywords">Protocol Execution Environment</comment> :<keyword type="license" value="CCB License" /> :<keyword type="release_date" value="2/28/2006" /> :<keyword type="version" value="1" /> :<keyword ont_term_id="Graphical_Integration" ont_url="http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#" ontology="BRO" type="data_type" value="Graphical_Integration" /> :</resource> </disco> t;/resource> </disco> |
| CurationStatus | curated + |
| DefiningCitation | http://pipeline.loni.ucla.edu + |
| Definition | The LONI Pipeline is a free workflow appli … The LONI Pipeline is a free workflow application primarily aimed at neuroimaging researchers that allows users to easily describe their executables in a graphical user interface (ie. create a module) and connect them together to create complex analyses all without having to code a single line in a scripting language. Instead of manually managing intermediate data in a script, the LONI Pipeline handles the passing of data between programs for you. With the LONI Pipeline users can quickly create workflows that take advantage of all the greatest neuroimaging tools available.
Once you’ve created a module for use in the LONI Pipeline, you can save it into your personal library and reuse it in other workflows you create by simply dragging and dropping it in. Because the LONI Pipeline is written in Java, you can work in whatever operating system suits you best. If there are tools that you need that can only work on another operating system, you can install a Pipeline server on that computer and connect from your client to do processing and analysis remotely. nt to do processing and analysis remotely. |
| ExampleImage |  + |
| Grant | Category:P41 RR013642 +, Category:R01 MH71940 +, and Category:U54 RR021813 + |
| Has default formThis property is a special property in this wiki. | Resource + |
| Has role | Software application + |
| Id | nif-0000-00322 + |
| Is part of | David Geffen School of Medicine at UCLA; California; USA +, and Resource:UCLA: Laboratory of Neuro Imaging + |
| Keywords | Workflow +, and Neuroscience + |
| Label | Resource:LONI Pipeline Processing Environment + |
| ModifiedDate | 6 January 2012 + |
| PMID | 12880830 + |
| Page has default formThis property is a special property in this wiki. | Resource + |
| SuperCategory | Resource + |
| Supporting Agency | NIH + |
