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Resource:REBASE

Name: Resource:REBASE
Description: Database of information about restriction enzymes and related proteins containing published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal, genome, and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Several tools are available including REBsites, BLAST against REBASE, NEBcutter and REBpredictor.

Putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. REBASE is updated daily and is constantly expanding.

Users may submit new enzyme and/or sequence information, recommend references, or send them corrections to existing data.

The contents of REBASE may be browsed from the web and selected compilations can be downloaded by ftp (ftp.neb.com). Additionally, monthly updates can be requested via email.
Other Name(s): Restriction Enzyme Database
Parent Organization: New England Biolabs Inc.
Supporting Agency: National Library of Medicine, New England Biolabs Inc.
Resource Type(s): Database, Data repository, Data analysis service
Keywords: endonuclease, enzyme, genome, archaeal, bacterial, cleavage, crystal, DNA, individual protein family databases, isochizomer, methylation, methyltransferase, modification, protein, recognition, restriction, restriction enzyme, sensitivity, sequence, site, methylase, cleavage site, restriction-modification, BLAST
Grant: LM04971
Abbreviation: REBASE
Resource: Resource
URL: http://rebase.neb.com
PMID: PMID 19846593, 17202163
Availability: The community can contribute to this resource., Public, please cite
Address: New England Biolabs, Inc, 240 County Road, Ipswich, MA 01938, USA.
Id: nif-0000-03391
Organism: microorganism
Link to OWL / RDF: Download this content as OWL/RDF

Curation status: Uncurated

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Notes

This page uses this default form:Resource

Old URL: http://rebase.neb.com, http://www.neb.com/rebase

Contributors

Aarnaud, Akash, Ccdbuser



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Facts about Resource:REBASERDF feed
AbbrevREBASE  +
AddressNew England Biolabs  +, Inc  +, 240 County Road  +, Ipswich  +, MA 01938  +, and USA.  +
AvailabilityPublic  +, Acknowledgement requested  +, and The community can contribute to this resource  +
CurationStatuscurated  +
DefiningCitationhttp://rebase.neb.com/rebase/  +
DefinitionDatabase of information about restriction Database of information about restriction enzymes and related proteins containing published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal, genome, and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Several tools are available including REBsites, BLAST against REBASE, NEBcutter and REBpredictor.

Putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. REBASE is updated daily and is constantly expanding.

Users may submit new enzyme and/or sequence information, recommend references, or send them corrections to existing data.

The contents of REBASE may be browsed from the web and selected compilations can be downloaded by ftp (ftp.neb.com). Additionally, monthly updates can be requested via email.
onthly updates can be requested via email.
ExampleImageREBASE.PNG  +
GrantCategory:LM04971   +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +, Data repository  +, and Data analysis service  +
Idnif-0000-03391  +
Is part ofNew England Biolabs Inc.  +
KeywordsEndonuclease  +, Enzyme  +, Genome  +, Archaeal  +, Bacterial  +, Cleavage  +, Crystal  +, DNA  +, Individual protein family databases  +, Isochizomer  +, Methylation  +, Methyltransferase  +, Modification  +, Protein  +, Recognition  +, Restriction  +, Restriction enzyme  +, Sensitivity  +, Sequence  +, Site  +, Methylase  +, Cleavage site  +, Restriction-modification  +, and BLAST  +
LabelResource:REBASE  +
ModifiedDate2 July 2013  +
PMID19846593, 17202163  +
Page has default formThis property is a special property in this wiki.Resource  +
SpeciesMicroorganism  +
SuperCategoryResource  +
Supporting AgencyNew England Biolabs Inc.  +, and National Library of Medicine  +
SynonymRestriction Enzyme Database  +