Resource:Sequence Tag Alignment and Consensus Knowledgebase Database
|Name:||Resource:Sequence Tag Alignment and Consensus Knowledgebase Database|
The STACKdb is knowledgebase generated by processing EST and mRNA sequences obtained from GenBank through a pipeline consisting of masking, clustering, alignment and variation analysis steps. The STACK project aims to generate a comprehensive representation of the sequence of each of the expressed genes in the human genome by extensive processing of gene fragments to make accurate alignments, highlight diversity and provide a carefully joined set of consensus sequences for each gene.
|Resource Type(s):||Database, Software resource, Data visualization software|
|Keywords:||exonic, expressed, expressed sequence tag (est), expression, fragment, gene, alignment, alternative gene, cdna, clone, cluster, developmental, disease, diversity, genome, homo sapiens, human, isoform, knowledgebase, meta-cluster, mrna, pathological, sequence, tissue, transcript, variant, visualization|
|Link to OWL / RDF:||Download this content as OWL/RDF|
Curation status: Uncurated
This resource will be curated within 7 days.
For Resource Owners:
After the resource is curated, you may create a sitemap, which will help keep your registry description up-to-date and inform search engines about your resource.
Note: For a new resource, the website's URL must first be verified by a NIF curator before you may proceed.
Learn more about what NIF can do for your resource.
Proudly proclaim your inclusion in NIF by displaying the "Registered with NIF" button on your site. Please login to create the sitemap. (top right)
This page uses this default form:Resource
*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.
The STACKdb is knowledgebase gener …
|Has default formThis property is a special property in this wiki.||Resource +|
|Has role||Database +, Software resource +, and Data visualization software +|
|Keywords||Exonic +, Expressed +, Expressed sequence tag (est) +, Expression +, Fragment +, Gene +, Alignment +, Alternative gene +, Cdna +, Clone +, Cluster +, Developmental +, Disease +, Diversity +, Genome +, Homo sapiens +, Human +, Isoform +, Knowledgebase +, Meta-cluster +, Mrna +, Pathological +, Sequence +, Tissue +, Transcript +, Variant +, and Visualization +|
|Label||Resource:Sequence Tag Alignment and Consensus Knowledgebase Database +|
|ModifiedDate||22 June 2013 +|
|Page has default formThis property is a special property in this wiki.||Resource +|