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Resource:MIPS - Munich Information Center for Protein Sequences

Name: Resource:MIPS - Munich Information Center for Protein Sequences
Description: The Munich Information Center for Protein Sequences (MIPS at the Helmholtz Center for Environmental Health, Neuherberg, Germany) supports and maintains a set of generic databases as well as the systematic comparative analysis of microbial, fungal, and plant genomes. It combines automatic processing of large amounts of sequences with manual annotation of selected model genomes.

Due to the massive growth of the available data, the depth of annotation varies widely between independent databases. Also, the criteria for the transfer of information from known to orthologous sequences are diverse. To cope with the task of global in-depth genome annotation has become unfeasible.

Therefore, our efforts are dedicated to three levels of annotation:

  1. the curation of selected genomes, in particular from fungal and plant taxa (e.g. CYGD, MNCDB, MatDB),
  2. the comprehensive, consistent, automatic annotation employing exhaustive methods for the computation of sequence similarities and sequence-related attributes as well as the classification of individual sequences (SIMAP, PEDANT and FunCat) and
  3. the compilation of manually curated databases for protein interactions based on scrutinized information from the literature to serve as an accepted set of reliable annotated interaction data (MPACT, MPPI, CORUM).
Other Name(s): Munich Information Center for Protein Sequences
Parent Organization: Institute of Bioinformatics and Systems Biology; Neuherberg; Germany
Supporting Agency: Federal Ministry of Education Science Research and Technology, German Federal Ministry of Education and Research, GABI Barlex, SysMBo, European Commission, (Framework 6 & 7, Grain Legumes Integrative Project, Triticeae Genome Project), Helmholtz Alliance Systems Biology
Related to: Resource:3DVC
Resource Type(s): Database
Keywords: Model
Grant: 0314000C, 0315494A
Abbreviation: MIPS
Resource: Resource
URL: http://www.helmholtz-muenchen.de/en/ibis
PMID: PMID 21109531
Id: nif-0000-03131
Link to OWL / RDF: Download this content as OWL/RDF

Parts of Resource:MIPS - Munich Information Center for Protein Sequences

Curation status: Uncurated

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Notes

This page uses this default form:Resource

Old URLs: http://mips.gsf.de/, http://mips.helmholtz-muenchen.de

This resource may be synonymous with Institute of Bioinformatics and Systems Biology

Contributors

Aarnaud, Akash



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Facts about Resource:MIPS - Munich Information Center for Protein SequencesRDF feed
AbbrevMIPS  +
CurationStatusuncurated  +
DefiningCitationhttp://www.helmholtz-muenchen.de/en/ibis  +
DefinitionThe Munich Information Center for Protein The Munich Information Center for Protein Sequences (MIPS at the Helmholtz Center for Environmental Health, Neuherberg, Germany) supports and maintains a set of generic databases as well as the systematic comparative analysis of microbial, fungal, and plant genomes. It combines automatic processing of large amounts of sequences with manual annotation of selected model genomes.

Due to the massive growth of the available data, the depth of annotation varies widely between independent databases. Also, the criteria for the transfer of information from known to orthologous sequences are diverse. To cope with the task of global in-depth genome annotation has become unfeasible.

Therefore, our efforts are dedicated to three levels of annotation:

  1. the curation of selected genomes, in particular from fungal and plant taxa (e.g. CYGD, MNCDB, MatDB),
  2. the comprehensive, consistent, automatic annotation employing exhaustive methods for the computation of sequence similarities and sequence-related attributes as well as the classification of individual sequences (SIMAP, PEDANT and FunCat) and
  3. the compilation of manually curated databases for protein interactions based on scrutinized information from the literature to serve as an accepted set of reliable annotated interaction data (MPACT, MPPI, CORUM). ted interaction data (MPACT, MPPI, CORUM).
GrantCategory:0314000C   +, and Category:0315494A   +
Has default formThis property is a special property in this wiki.Resource  +
Has roleDatabase  +
Idnif-0000-03131  +
Is part ofInstitute of Bioinformatics and Systems Biology; Neuherberg; Germany  +
KeywordsModel  +
LabelResource:MIPS - Munich Information Center for Protein Sequences  +
ModifiedDate1 May 2013  +
PMID21109531  +
Page has default formThis property is a special property in this wiki.Resource  +
RelatedToResource:3DVC  +
SuperCategoryResource  +
Supporting AgencyFederal Ministry of Education Science Research and Technology  +, German Federal Ministry of Education and Research  +, GABI Barlex  +, SysMBo  +, European Commission  +, (Framework 6 & 7  +, Grain Legumes Integrative Project  +, Triticeae Genome Project)  +, and Helmholtz Alliance Systems Biology  +
SynonymMunich Information Center for Protein Sequences  +