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Software application

Name: Software application
Description: Binary executable is a digital entity consisting of the binary representation of machine instructions of a specific processor or they may be binary pseudocode for a virtual machine. A non-source executable file is also called an object program. It is assumed that the binary executable file contains properly-formatted computer instructions. (derived from Wikipedia, Nov 1, 2007) NITRC definition: Software programs designed to run on a computer.
Synonym(s): Application, Binary executable, Software program
Super-category: Software resource
Id: birnlex_11012
Link to OWL / RDF: Download this content as OWL/RDF

Categories with role Software application

ABEAT, Resource:2DMAP, Resource:2LD, Resource:2SNP, Resource:4Peaks, Resource:ACT, Resource:ADEGENET, Resource:ADMIXMAP, Resource:AGEINF, Resource:ALBERT, Resource:ALLASS, Resource:ALLEGRO, Resource:ALLELIX, Resource:ALOHOMORA, Resource:ALP, Resource:ALTREE, Resource:ALVIN, Resource:AMELIA, Resource:ANALYZE, Resource:ANCESTRY, Resource:ANNOVAR, Resource:ANTMAP, Resource:APE, Resource:APL-OSA, Resource:APM, Resource:ARACNE, Resource:ARIEL, Resource:ARLEQUIN, Resource:ARP.GEE, Resource:ASP/ASPSHARE, Resource:ASPEX, Resource:ASSOCIATIONVIEWER, Resource:AUTOSCAN, Resource:Alfresco - FRont-End for Sequence COmparison, Resource:Alien hunter, Resource:Allen Brain Atlas API, Resource:Allopathfinder, Resource:AltAnalyze - Alternative Splicing Analysis Tool, Resource:AmiGO, Resource:Ancestrymap, Resource:Apollo, Resource:ArchSchema, Resource:Automatic Segmentation Tool Adapter, Resource:BAMA, Resource:BARS, Resource:BAYESFST, Resource:BDGEN, Resource:BEAGLE, Resource:BEAGLECALL, Resource:BEAM, Resource:BESA, Resource:BETA, Resource:BIMBAM, Resource:BIOIDE, Resource:BIOLAD-DB, Resource:BIRDSUITE, Resource:BLADE, Resource:BLOCK, Resource:BMAPBUILDER, Resource:BOMP: beta-barrel Outer Membrane protein Predictor, Resource:BOOLD, Resource:BOOST, Resource:BOOSTRAPPER, Resource:BOREL, Resource:BOTTLENECK, Resource:BPPH, Resource:BQTL, Resource:BRAINSCortex, Resource:BREAKDANCER, Resource:BioLit, Resource:BioMail, Resource:BioMesh3D, Resource:Bioscholar, Resource:Blast2GO, Resource:Booly: A Resource for Biological Data Integration, Resource:Brain Decoder Toolbox, Resource:BrainGraph Editor, Resource:BrainLiner, Resource:BrainVoyager Brain Tutor, Resource:CAROL, Resource:CARTHAGENE, Resource:CASAVA, Resource:CASPAR, Resource:CATMAID, Resource:CATS, Resource:CC-QLS, Resource:CCRAVAT, Resource:CCREL, Resource:CEPH2CRI, Resource:CEPH2MAP, Resource:CFC, Resource:CHAPLIN, Resource:CHECKHET, Resource:CHECKMATRIX, Resource:CHIAMO, Resource:CHIP2SPELL, Resource:CHROMOSCAN, Resource:CHROMOSEG, Resource:CHROMSCAN, Resource:CLUMP, Resource:CLUSTAG, Resource:CMAP, Resource:COEUS, Resource:COMBIN, Resource:COMDS, Resource:COMPOSITELD, Resource:COPE, Resource:COVIBD, Resource:COnsensus-DEgenerate Hybride Oligonucleotide Primers, Resource:CRIMAP, Resource:CRIMAP-PVM, Resource:CROSSFIND, Resource:CYRILLIC, Resource:ChEA, Resource:Clinical Trial Management Application, Resource:Computational Morphometry Toolkit, Resource:Connectome Viewer, Resource:DBD - Slim Gene Ontology, Resource:DCHIP LINKAGE, Resource:DGENE, Resource:DHSMAP, Resource:DICOM UploadGUI, Resource:DINDEL, Resource:DISENTANGLER, Resource:DMAP, Resource:DMLE, Resource:DNABASER, Resource:DNAPlotter, Resource:DOLINK, Resource:DONE: Detection of Outlier NEurons, Resource:DPPH, Resource:DSpace, Resource:DWI/DTI Quality Control Tool: DTIPrep, Resource:Dataverse Network Project, Resource:Datavyu, Resource:Db for Dummies!, Resource:Debian, Resource:DicomBrowser, Resource:DicomWorks, Resource:Diffusion Tractography with Kalman Filter, Resource:E-Prime, Resource:E-Prime Extensions for fMRI, Resource:EAGLET, Resource:EASYLINKAGE/EASYLINKAGE-PLUS, Resource:EASYPOP, Resource:ECLIPSE, Resource:EDAC, Resource:EEProbe, Resource:EH, Resource:EHAP, Resource:EHP, Resource:EHPLUS, Resource:EIGENSOFT/EIGENSTRAT, Resource:EM-DECODER, Resource:EMLD, Resource:ENDOG, Resource:ENTROPY BLOCKER, Resource:EPDT, Resource:EPISTACY, Resource:EQTL EXPLORER, Resource:ERPA, Resource:ET-TDT, Resource:ETDT, Resource:EVOKER, Resource:EXOMEPICKS, Resource:EagleI, Resource:EarLab, Resource:FAMHAP, Resource:FAMOZ, Resource:FASTEHPLUS, Resource:FASTER, Resource:FASTLINK, Resource:FASTMAP (1), Resource:FASTMAP (2), Resource:FASTSLINK, Resource:FBAT, Resource:FBIRN Image Processing Scripts, Resource:FEST, Resource:FESTA, Resource:FINESSE, Resource:FINETTI, Resource:FIRSTORD, Resource:FISHER, Resource:FLOSS, Resource:FMRIpower, Resource:FSST - Functional Similarity Search Tool, Resource:False Discovery Rate Weighted, Resource:Fiber-tracking based on Finsler distance, Resource:FiberViewerLight, Resource:Finsler tractography module for Slicer, Resource:G-MENDEL, Resource:GAIA, Resource:GAMBIT, Resource:GAP, Resource:GAS, Resource:GAS2, Resource:GASP, Resource:GASSOC, Resource:GC/GCF, Resource:GCHAP, Resource:GDA, Resource:GEMS, Resource:GENECLASS, Resource:GENECOUNTING, Resource:GENEFINDER, Resource:GENEHUNTER, Resource:GENEHUNTER SAD, Resource:GENEHUNTER++SAD, Resource:GENEHUNTER-IMPRINTING, Resource:GENEHUNTER-MODSCORE, Resource:GENEHUNTER-PLUS, Resource:GENEHUNTER-TWOLOCUS, Resource:GENEPI.JAR, Resource:GENEPOOL, Resource:GENEPOP, Resource:GENERECON, Resource:GENESPRING GT, Resource:GENETIC POWER CALCULATOR, Resource:GENETSIM, Resource:GENEVAR, Resource:GENEWEAVER, Resource:GENIE, Resource:GENOCHECK, Resource:GENOGRAM-MAKER, Resource:GENOME, Resource:GENOMESIMLA, Resource:GENOMIZER, Resource:GENOOM, Resource:GENOPROOF, Resource:GENTOOLS, Resource:GERMLINE, Resource:GEST, Resource:GEVALT, Resource:GGSD, Resource:GGT, Resource:GHOST, Resource:GIMIAS, Resource:GLFSINGLE/GLFTRIO/GLFMULTIPLES, Resource:GLIDERS, Resource:GLUE, Resource:GMA, Resource:GMCHECK, Resource:GOblet, Resource:GREGOR, Resource:GRIDQTL, Resource:GRONLOD, Resource:GRR, Resource:GS-EM, Resource:GSMA, Resource:GTOOL, Resource:GWAPOWER, Resource:GWASELECT, Resource:GenGen, Resource:Genboree Discovery System, Resource:GeneMerge, Resource:GeneNetworkBuilder, Resource:Genes to Cognition Online, Resource:Genotype-IBD Sharing Test, Resource:Geriatric Depression Scale, Resource:GoSurfer, Resource:Gradient Non-linearity Unwarping Tool, Resource:Graphical Overview of Linkage Disequilibrium, Resource:HAP 1, Resource:HAP 2, Resource:HAP-SAMPLE, Resource:HAPAR, Resource:HAPASSOC, Resource:HAPBLOCK, Resource:HAPBLOCK 2, Resource:HAPGEN, Resource:HAPINFERX, Resource:HAPLO 1, Resource:HAPLO 2, Resource:HAPLO.STAT, Resource:HAPLOBLOCK, Resource:HAPLOBLOCKFINDER, Resource:HAPLOBUILD, Resource:HAPLOCLUSTERS, Resource:HAPLOPAINTER, Resource:HAPLOPOOL, Resource:HAPLORE, Resource:HAPLOREC, Resource:HAPLOT, Resource:HAPLOTTER, Resource:HAPLOTYPE ESTIMATION, Resource:HAPLOTYPER, Resource:HAPLOVISUAL, Resource:HAPLOWSER, Resource:HAPMINER, Resource:HAPMIXMAP, Resource:HAPSCOPE, Resource:HAPSIMU, Resource:HAPSTAT, Resource:HARDY, Resource:HCLUST, Resource:HEGESMA, Resource:HELIXTREE, Resource:HIT, Resource:HOMOG/HOMOGM, Resource:HOTSPOTTER, Resource:HPLUS, Resource:HS-TDT, Resource:HTR, Resource:HTSNPER, Resource:HWESTRATA, Resource:HWMET, Resource:Hanalyzer, Resource:Hapmix, Resource:Hardy-Weinberg Equilibrium Calculator, Resource:Hitachi2nirs, Resource:Human Protein-Protein Interaction Mining Tool, Resource:IBDREG, Resource:IGG, Resource:ILLUMINUS, Resource:ILR, Resource:IMPUTE, Resource:INSEGT, Resource:INTEGRAYEDMAP, Resource:INTERSNP, Resource:IgBLAST, Resource:Ingenuity Pathway Analysis, Resource:Integrated Content Environment, Resource:J/QTL, Resource:JENTI, Resource:JLIN, Resource:JOINMAP, Resource:JPSGCS, Resource:KIN, Resource:KING, Resource:Karma, Resource:KegTools, Resource:Knowledge Engineering from Experimental Design, Resource:L-POP, Resource:LAMARC, Resource:LAMBDAA, Resource:LAMP, Resource:LAPSTRUCT, Resource:LCP, Resource:LDA, Resource:LDB/LDB+, Resource:LDDMM, Resource:LDGROUP, Resource:LDHAT, Resource:LDHEATMAP, Resource:LDMAP, Resource:LDMET, Resource:LDSELECT, Resource:LDSUPPORT, Resource:LEA, Resource:LINKAGE - CEPH, Resource:LINKAGE - general pedigrees, Resource:LINKAGE-IMPRINT, Resource:LINKBASE, Resource:LIPED, Resource:LNKTOCRI, Resource:LOCUSMAP, Resource:LOCUSZOOM, Resource:LOGINSERM ESTIHAPLO, Resource:LOH-LINKAGE, Resource:LOKI, Resource:LONI De-identification Debablet, Resource:LONI Debabeler, Resource:LONI Provenance Editor, Resource:LONI Software Applications, Resource:LOT, Resource:LRP, Resource:LRTAE, Resource:LSP, Resource:LTSOFT, Resource:MADELINE, Resource:MADMAPPER, Resource:MAKEPED, Resource:MALDSOFT, Resource:MAMA, Resource:MANTEL-STRUCT, Resource:MAOS, Resource:MAP MANAGER QT, Resource:MAP MANAGER QTX, Resource:MAP/MAP+/MAP+H/MAP2000, Resource:MAPCHART, Resource:MAPCREATOR, Resource:MAPDISTO, Resource:MAPDRAW, Resource:MAPINSPECT, Resource:MAPL, Resource:MAPMAKER/EXP, Resource:MAPMAKER/HOMOZ, Resource:MAPMAKER/QTL, Resource:MAPMAKER/SIBS, Resource:MAPPOP, Resource:MAPQTL, Resource:MAREYMAP, Resource:MARGARITA, Resource:MATLINK, Resource:MCLEEPS, Resource:MCQTL, Resource:MDBLOCKS, Resource:MDR, Resource:MDR-PDT, Resource:MECPM, Resource:MEG Tools, Resource:MEGA2, Resource:MEGASNPHUNTER, Resource:MENDEL, Resource:MENDELSOFT, Resource:MERLIN, Resource:METAL, Resource:MFLINK, Resource:MGA-MAPF2, Resource:MIDAS, Resource:MILD, Resource:MINIMAC, Resource:MINSAGE, Resource:MITPENE, Resource:MIXSCORE, Resource:MKGST, Resource:MLBGH, Resource:MLD, Resource:MLR-TAGGING, Resource:MMDRAWER, Resource:MOLKIN, Resource:MORGAN, Resource:MOSCPHASER, Resource:MPDA, Resource:MRH, Resource:MULTIDISEQ, Resource:MULTIMAP, Resource:MULTIMAPPER, Resource:MULTIMAPPER/OUTBRED, Resource:MULTIPOPTAGSELECT, Resource:MULTIQTL, Resource:MULTISIM, Resource:MUTAGENESYS, Resource:MaCH-Admix, Resource:Mach2dat, Resource:MapMan, Resource:Marker And Gene Interpolation and Correlation, Resource:MazeSuite, Resource:Mesh-based Monte Carlo (MMC), Resource:Midas Platform, Resource:MoTrak Head Motion Tracking System, Resource:ModelGUI, Resource:ModelMaker, Resource:MultiTracer, Resource:Multipoint Identical-by-descent Method, Resource:NCI Flicker Web Server., Resource:NFT, Resource:NGS-Cleaner, Resource:NIRx NIRS Neuroimaging, Resource:NIRx2nirs: A NIRx to .nirs data converter, Resource:NOCOM, Resource:NOPAR, Resource:NSeq, Resource:NUCULAR, Resource:NVM, Resource:Net Station EEG Software, Resource:NetNGlyc, Resource:NetOGlyc, Resource:Neural Maestro, Resource:Nipype, Resource:NordicNeuroLab, Resource:OBO-Edit, Resource:OLORIN, Resource:ONEMAP, Resource:OSA, Resource:OSIRIS, Resource:Object-Oriented Development Interface for NMR, Resource:OpenMEEG, Resource:Optseq - fMRI Event Scheduler, Resource:P ACT, Resource:PANGAEA, Resource:PAP, Resource:PARENTE, Resource:PASS PEDIGREE, Resource:PATH, Resource:PAWE, Resource:PAWE-3D, Resource:PBAT, Resource:PDA, Resource:PDPSYS, Resource:PDT, Resource:PED, Resource:PEDAGREE, Resource:PEDCHECK, Resource:PEDFIDDLER, Resource:PEDHUNTER, Resource:PEDIGRAPH, Resource:PEDIGREE-VISUALIZER, Resource:PEDIGREE/DRAW, Resource:PEDIGREEQUERY, Resource:PEDJAVA, Resource:PEDMANAGER, Resource:PEDPACK, Resource:PEDPEEL, Resource:PEDPHASE, Resource:PEDPLOT, Resource:PEDRAW/WPEDRAW, Resource:PEDSCRIPT, Resource:PEDSTATS, Resource:PEDSYS, Resource:PEDVIZAPI, Resource:PEER, Resource:PELICAN, Resource:PESTICA fMRI Physio Detection/Correction, Resource:PHASE, Resource:PIAGE, Resource:PL-EM, Resource:PLABQTL, Resource:PLABSIM, Resource:PLAYPUS, Resource:PLINK/SEQ, Resource:POINTER, Resource:POLYMORPHISM, Resource:POLYMUTT, Resource:POLYPHEN, Resource:POOL STR, Resource:POOLSCORE, Resource:POPDIST, Resource:POPGEN, Resource:POWER, Resource:POWERMARKER, Resource:POWERTRIM, Resource:POWQ, Resource:POWTEST, Resource:PREPLINK, Resource:PREST, Resource:PRESTO, Resource:PROBMAX, Resource:PROC QTL, Resource:PROFILER, Resource:PRT, Resource:PSAT, Resource:PSEUDO, Resource:PSEUDOMARKER, Resource:PSEUDOMARKER.M, Resource:PYPOP, Resource:Paradigm, Resource:PhenoFam, Resource:PhenoTips, Resource:Power Atlas, Resource:Presentation, Resource:PsychoPy, Resource:Publish or perish, Resource:PyMVPA, Resource:Pythonxy, Resource:QMSIM, Resource:QTDT, Resource:QTL CAFE, Resource:QTL Cartographer, Resource:QTL EXPRESS, Resource:QTL-ALL, Resource:QTLNETWORK, Resource:QU-GENE, Resource:QUANTO, Resource:QUTIE, Resource:R/ADEGENET, Resource:R/ARP.GEE, Resource:R/BARS, Resource:R/COMPOSITELD, Resource:R/COVIBD, Resource:R/EHP, Resource:R/ENTROPY BLOCKER, Resource:R/FEST, Resource:R/GAP, Resource:R/GC, R/GCF, Resource:R/GWAPOWER, Resource:R/HAPASSOC, Resource:R/HCLUST, Resource:R/IBDREG, Resource:R/LAPSTRUCT, Resource:R/LDGROUP, Resource:R/LDHEATMAP, Resource:R/LUCA, Resource:R/META, Resource:R/METASIM, Resource:R/ONEMAP, Resource:R/PIAGE, Resource:R/POOLSCORE, Resource:R/POPGEN, Resource:R/QTL, Resource:R/QTLBIM, Resource:R/QTLDESIGN, Resource:R/SNP.PLOTTER, Resource:R/SPECTRAL-GEM, Resource:R/STEPWISE, Resource:R/TDTHAP, Resource:R/WEIGHTED FDR, Resource:RC-TDT, Resource:REAPER, Resource:RECORD, Resource:RELATIVE, Resource:RELATIVEFINDER, Resource:RELCHECK, Resource:RELPAIR, Resource:RELTYPE, Resource:RFT FDR, Resource:RHMAP, Resource:RHMAPPER, Resource:RISCALW, Resource:ROMPREV, Resource:ROSATTA SYLLEGO SYSTEM, Resource:RTDT, Resource:RVTESTS, Resource:RightField, Resource:S, Resource:SAGE, Resource:SAS/GENETICS, Resource:SASGENE, Resource:SASQUANT, Resource:SCORE-SEQ, Resource:SCOUT, Resource:SDMINP, Resource:SEGPATH, Resource:SELSIM, Resource:SEQUENCE LD/SEQUENCE LDHOT, Resource:SET, Resource:SGS, Resource:SHRINE, Resource:SIB-PAIR, Resource:SIBERROR, Resource:SIBLINK, Resource:SIBMED, Resource:SIBSIM, Resource:SILCLOD, Resource:SIMCOAL, Resource:SIMHAP, Resource:SIMIBD, Resource:SIMLA, Resource:SIMLINK, Resource:SIMM, Resource:SIMPED, Resource:SIMPLE, Resource:SIMULA, Resource:SIMULAPLOT, Resource:SIMULATE, Resource:SIMUPOP, Resource:SIMWALK, Resource:SKAT, Resource:SLINK, Resource:SMOOTH, Resource:SNAP - SNP Annotation and Proxy Search, Resource:SNAP 3, Resource:SNIPPEEP, Resource:SNP ASSISTANT, Resource:SNP CHART, Resource:SNP HITLINK, Resource:SNP-HWE, Resource:SNP.PLOTTER, Resource:SNPALYZE, Resource:SNPEM, Resource:SNPFILE, Resource:SNPHAP, Resource:SNPHARVESTER, Resource:SNPLINK, Resource:SNPMSTAT, Resource:SNPP, Resource:SNPTEST, Resource:SOLAR, Resource:SPAM, Resource:SPECTRAL-GEM, Resource:SPERM, Resource:SPERMSEG, Resource:SPHARM-MAT, Resource:SPHARM-PDM Toolbox, Resource:SPIP, Resource:SPLAT, Resource:SPLINK, Resource:SPREG, Resource:SQTDT/SPDT, Resource:SQTL, Resource:SSAHASNP, Resource:STAPLE, Resource:START, Resource:STEPC, Resource:STEPWISE, Resource:STRAT, Resource:STRUCTURE, Resource:SUMSTAT, Resource:SUP, Resource:SUPERLINK, Resource:SVA, Resource:SVCC, Resource:SWEEP, Resource:SYZYGY, Resource:Sapienta, Resource:Scalable Brain Atlas, Resource:Segmentation Validation Engine, Resource:ShapeComplexAtlas, Resource:ShapeWorks, Resource:Shiny, Resource:Show of Hands, Resource:Sleuth, Resource:Slicer3 Example Modules, Resource:Solar Eclipse Imaging Genetics tools, Resource:Source Information Flow Toolbox, Resource:Spatial Analysis 3D, Resource:Statistics Online Computational Resource, Resource:Substructure Index-based Approximate Graph Alignment, Resource:Suite of Nucleotide Analysis Programs, Resource:TAGGER, Resource:TAGIMPUTE, Resource:TAGSNP, Resource:TAGSTER, Resource:TARGETgene, Resource:TARQUIN, Resource:TASSEL, Resource:TDT-AE, Resource:TDT-PC, Resource:TDT/S-TDT, Resource:TDTASP, Resource:TDTHAP, Resource:TDTPOWER, Resource:TFPGA, Resource:THESIAS, Resource:THOR Center for Neuroinformatics, Resource:TKMAP, Resource:TLINKAGE, Resource:TOMCAT, Resource:TRANSMIT, Resource:TRAP, Resource:TREELD, Resource:TREESCAN, Resource:TREESELECT, Resource:TRIMHAP, Resource:TUNA, Resource:TWOLOC, Resource:TheDataWeb and DataFerrett, Resource:TraDES, Resource:TractoR: Tractography with R, Resource:UMAKE, Resource:UNAFold, Resource:UNKNOWN, Resource:UNPHASED, Resource:UTIL, Resource:Utopia Documents, Resource:VAAST, Resource:VARSCAN, Resource:VG, Resource:VH, Resource:VITESSE, Resource:VIVO, Resource:VR Worlds 2, Resource:Vascular Modeling Toolkit, Resource:WEBQTL, Resource:WEIGHTED FDR, Resource:WHAIT, Resource:WHICHRUN, Resource:Wandora, Resource:WebImageBrowser, Resource:Whap, Resource:Wolfram Alpha Computational Knowledge Engine, Resource:Working Memory Trainer, Resource:Xournal, Resource:YinOYang, Resource:Yogo Data Management System, Resource:ZAPLO, Resource:brainmap.org, Resource:caTRIP, Resource:cortex, Resource:dinifti, Resource:eCAT electronic lab notebook, Resource:eNeoTutor, Resource:fMRI Artefact rejection and Sleep Scoring Toolbox, Resource:fMRI-CPCA, Resource:iBIOFind, Resource:imcalc: SPM batch image calulator, Resource:iso2mesh, Resource:neurodebian, Resource:scikit-learn, Resource:scrible, Resource:shapeAnalysisMANCOVA - SPHARM tools, Resource:signalml.org, Resource:splitneuron have the role Software application



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Alt. definition: A resource that provides any tool that functions and is operated by means of a computer, with the purpose of supporting or improving the software user's work. In other words, it is the subclass of computer software that employs the capabilities of a computer directly and thoroughly to a task that the user wishes to perform. This should be contrasted with system software (infrastructure) or middleware (computer services/ processes integrators) which is involved in integrating a computer's various capabilities, but typically does not directly apply them in the performance of tasks that benefit the user. In this context the term application refers to both the application software and its implementation. Example: L-Measure.

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ABEAT University of North Carolina at Chapel Hill; North Carolina; USA http://www.med.unc.edu/bric/ideagroup/free-softwares/abeat-a-toolbox-for-consistent-analysis-of-longitudinal-adult-brain-mri
Resource:2DMAP http://www.genlink.wustl.edu/software
Resource:2LD http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software.htm
Resource:2SNP http://alla.cs.gsu.edu/~software/2SNP/
Resource:4Peaks http://nucleobytes.com/index.php/4peaks
Resource:ACT http://www.epigenetic.org/Linkage/act.html,
Resource:ADEGENET
Resource:ADMIXMAP http://www.homepages.ed.ac.uk/pmckeigu/admixmap/index.html
Resource:AGEINF http://www.math.sfu.ca/~jgraham/Papers/Programs/AgeCode/
Resource:ALBERT http://www.stat.washington.edu/thompson/Genepi/Albert/albert.shtml
Resource:ALLASS http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/ALLASS
Resource:ALLEGRO http://www.decode.com/software/
Resource:ALLELIX http://www.allelix.net
Resource:ALOHOMORA http://gmc.mdc-berlin.de/alohomora/
Resource:ALP http://www.hgu.mrc.ac.uk/Softdata/ALP/
Resource:ALTREE http://claire.bardel.free.fr/software.html
Resource:ALVIN http://sites.google.com/site/mrilateralventricle/
Resource:AMELIA http://www.sanger.ac.uk/resources/software/amelia/
Resource:ANALYZE http://www.helsinki.fi/~tsjuntun/linkage/analyze/; http://linkage.cpmc.columbia.edu/index_files/Page434.htm;
Resource:ANCESTRY http://ciil.case.edu:3000
Resource:ANNOVAR Resource:OpenBioinformatics.org http://www.openbioinformatics.org/annovar/ ANNOVAR.PNG
Resource:ANTMAP http://lbm.ab.a.u-tokyo.ac.jp/~iwata/antmap/
Resource:APE http://www.helsinki.fi/~mpirinen/download
Resource:APL-OSA http://wwwchg.duhs.duke.edu/research/aplosa.html
Resource:APM http://watson.hgen.pitt.edu/register/soft_doc.html registration page at: http://watson.hgen.pitt.edu/register
Resource:ARACNE Columbia University; New York; USA http://wiki.c2b2.columbia.edu/califanolab/index.php/Software/ARACNE ARACNE.PNG
Resource:ARIEL http://www.sanger.ac.uk/resources/software/ariel/
Resource:ARLEQUIN http://cmpg.unibe.ch/software/arlequin3/
Resource:ARP.GEE http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm
Resource:ASP/ASPSHARE http://www.uni-kiel.de/medinfo/mitarbeiter/krawczak/download/
Resource:ASPEX http://aspex.sourceforge.net/
Resource:ASSOCIATIONVIEWER http://associationviewer.vital-it.ch/
Resource:AUTOSCAN http://www.helsinki.fi/~tsjuntun/autoscan/
Resource:Alfresco - FRont-End for Sequence COmparison Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/alfresco/
Resource:Alien hunter Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/alien_hunter/
Resource:Allen Brain Atlas API Resource:Allen Institute for Brain Science http://www.brain-map.org/api/index.html Allen Brain Atlas API.PNG
Resource:Allopathfinder Resource:Simtk.org https://simtk.org/home/allopathfinder AlloPathFinder.PNG
Resource:AltAnalyze - Alternative Splicing Analysis Tool University of California at San Francisco; California; USA http://www.altanalyze.org/ AltAnalyze.PNG
Resource:AmiGO Resource:GO http://amigo.geneontology.org/ AmiGO.PNG
Resource:Ancestrymap Harvard Medical School; Massachusetts; USA http://genetics.med.harvard.edu/reich/Reich_Lab/Software.html ANCESTRYMAP.PNG
Resource:Apollo Resource:Generic Model Organism Database Project http://gmod.org/wiki/Apollo
Resource:ArchSchema Resource:European Bioinformatics Institute http://www.ebi.ac.uk/thornton-srv/databases/archschema/ ArchSchema.PNG
Resource:Automatic Segmentation Tool Adapter http://www.nitrc.org/projects/segadapter/
Resource:BAMA http://www.rni.helsinki.fi/~mjs/
Resource:BARS http://wpicr.wpic.pitt.edu/WPICCompGen/bars.htm
Resource:BAYESFST http://www.reading.ac.uk/Statistics/genetics/software.html
Resource:BDGEN http://www.simedic.com.ar/bdgen.htm
Resource:BEAGLE University of Washington; Washington; USA http://faculty.washington.edu/browning/beagle/beagle.html BEAGLE.PNG
Resource:BEAGLECALL http://faculty.washington.edu/browning/beaglecall/beaglecall.html
Resource:BEAM http://www.people.fas.harvard.edu/~junliu/BEAM/
Resource:BESA http://besa.de
Resource:BETA http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/BETA
Resource:BIMBAM http://stephenslab.uchicago.edu/software.html
Resource:BIOIDE http://www.htbiology.com/software.php
Resource:BIOLAD-DB http://www.rockefeller.edu/biolad-db/
Resource:BIRDSUITE Resource:Broad Institute http://www.broadinstitute.org/scientific-community/science/programs/medical-and-population-genetics/birdsuite/birdsuite Birdsuite.PNG
Resource:BLADE http://www.people.fas.harvard.edu/~junliu/index1.html
Resource:BLOCK http://www.cs.auc.dk/~claus/block.html
Resource:BMAPBUILDER http://bios.ugr.es/BMapBuilder/
Resource:BOMP: beta-barrel Outer Membrane protein Predictor University of Bergen; Bergen; Norway http://www.bioinfo.no/tools/bomp
Resource:BOOLD http://www.geneticepi.com/Research/software/software.html
Resource:BOOST http://bioinformatics.ust.hk/BOOST.html
Resource:BOOSTRAPPER http://bioinfo.ebc.ee/download/
Resource:BOREL http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:BOTTLENECK http://www.montpellier.inra.fr/URLB/bottleneck/bottleneck.html
Resource:BPPH http://wwwcsif.cs.ucdavis.edu/~gusfield/bpph.html
Resource:BQTL http://hacuna.ucsd.edu/bqtl/
Resource:BRAINSCortex Resource:BRAINS https://github.com/BRAINSia/BRAINSTools
Resource:BREAKDANCER Washington University School of Medicine in St. Louis; Missouri; USA http://gmt.genome.wustl.edu/breakdancer/current/
Resource:BioLit University of California at San Diego; California; USA http://biolit.ucsd.edu/doc/
Resource:BioMail Resource:SourceForge http://biomail.sourceforge.net/biomail/
Resource:BioMesh3D University of Utah; Utah; USA http://www.sci.utah.edu/cibc/software/231-biomesh3d.html
Resource:Bioscholar University of Southern California; California; USA http://www.isi.edu/projects/bioscholar/overview BioScholar.PNG
Resource:Blast2GO Resource:Principe Felipe Research Centre; Valencia; Spain http://www.blast2go.com/b2ghome B2G.PNG
Resource:Booly: A Resource for Biological Data Integration University of California at San Diego; California; USA http://booly.ucsd.edu
Resource:Brain Decoder Toolbox ATR; Kyoto; Japan http://www.cns.atr.jp/dni/en/downloads/brain-decoder-toolbox/
Resource:BrainGraph Editor Resource:Laboratory of Neuro Imaging http://www.loni.usc.edu/Software/moreinfo.php?package=BGE
Resource:BrainLiner ATR; Kyoto; Japan http://brainliner.jp BrainLiner.PNG
Resource:BrainVoyager Brain Tutor Resource:Brain Innovation: Home of the BrainVoyager Product Family http://www.brainvoyager.com/products/braintutor.html BrainVoyager Brain Tutor.PNG
Resource:CAROL Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/carol/ CAROL.PNG
Resource:CARTHAGENE http://www.inra.fr/mia/T/CarthaGene/
Resource:CASAVA http://www.illumina.com/software/genome_analyzer_software.ilmn
Resource:CASPAR http://www.ncbi.nlm.nih.gov/CBBresearch/Schaffer/caspar.html
Resource:CATMAID Max Planck Institute of Molecular Cell Biology and Genetics; Dresden; Germany http://catmaid.org/ CATMAID.PNG
Resource:CATS http://www.sph.umich.edu/csg/abecasis/CaTS/
Resource:CC-QLS http://www.stat.uchicago.edu/~mcpeek/software/CCQLSpackage1.3/
Resource:CCRAVAT http://www.sanger.ac.uk/resources/software/rarevariant/
Resource:CCREL http://www.stat.auckland.ac.nz/~browning/ccrel/ccrel.htm
Resource:CEPH2CRI http://www.gene.ucl.ac.uk/public-files/packages/linkage_utils/ceph2cri/
Resource:CEPH2MAP http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/ceph2map
Resource:CFC http://agrews.agr.niigata-u.ac.jp/~iwsk/cfc.html
Resource:CHAPLIN http://www.genetics.emory.edu/labs/epstein/software/chaplin/index.html
Resource:CHECKHET http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:CHECKMATRIX http://www.atgc.org/XLinkage/
Resource:CHIAMO http://www.stats.ox.ac.uk/~marchini/software/gwas/chiamo.html
Resource:CHIP2SPELL http://www.statgen.org/main/index.php/Downloads/Downloads
Resource:CHROMOSCAN http://www.epidkardia.sph.umich.edu/software/chromoscan/
Resource:CHROMOSEG http://ib.berkeley.edu/labs/slatkin/eriq/software/software.htm
Resource:CHROMSCAN http://www.som.soton.ac.uk/research/geneticsdiv/epidemiology/chromscan/
Resource:CLUMP http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:CLUSTAG Hong Kong Baptist University; Hong Kong; China http://www.math.hkbu.edu.hk/~mng/CLUSTAG/CLUSTAG.html
Resource:CMAP Resource:Generic Model Organism Database Project http://gmod.org/wiki/Cmap
Resource:COEUS University of Aveiro; Aveiro; Portugal http://bioinformatics.ua.pt/coeus/ COEUS.PNG
Resource:COMBIN http://www.dpw.wau.nl/pv/pub/combin/
Resource:COMDS http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/comds
Resource:COMPOSITELD http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm
Resource:COPE http://www.infobiogen.fr/services/CoPE
Resource:COVIBD http://wpicr.wpic.pitt.edu/WPICCompGen/newcovibd/covibd.htm
Resource:COnsensus-DEgenerate Hybride Oligonucleotide Primers University of Washington; Washington; USA http://blocks.fhcrc.org/blocks/codehop.html
Resource:CRIMAP http://compgen.rutgers.edu/Crimap/
Resource:CRIMAP-PVM http://compgen.rutgers.edu/multimap/crimappvm.html
Resource:CROSSFIND http://www.gene.ucl.ac.uk/public-files/packages/jattwood/
Resource:CYRILLIC http://www.cyrillicsoftware.com Cyrillic.PNG
Resource:ChEA Mount Sinai School of Medicine; New York; USA http://amp.pharm.mssm.edu/lib/chea.jsp
Resource:Clinical Trial Management Application University of Pittsburgh; Pennsylvania; USA http://www.dbmi.pitt.edu/services/ctma.html
Resource:Computational Morphometry Toolkit Resource:neurodebian http://neuro.debian.net/pkgs/cmtk.html
Resource:Connectome Viewer Resource:Connectome Mapping Toolkit http://www.connectomeviewer.org/viewer/
Resource:DBD - Slim Gene Ontology Resource:Db for Dummies! http://www.dbfordummies.com/go.asp Slim Gene Ontology.PNG
Resource:DCHIP LINKAGE http://www.biostat.harvard.edu/complab/dchip/snp.htm
Resource:DGENE registration page at: http://www.biomath.medsch.ucla.edu/faculty/klange/software.html
Resource:DHSMAP http://galton.uchicago.edu/~mcpeek/software/dhsmap/
Resource:DICOM UploadGUI http://www.nitrc.org/projects/dicomuploadgui/
Resource:DINDEL Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/dindel/ Dindel.PNG
Resource:DISENTANGLER http://kumasakanatsuhiko.jp/projects/disentangler/
Resource:DMAP http://www.math.sfu.ca/~jgraham/Papers/Programs/DisequilibriumMapping/
Resource:DMLE http://www.dmle.org/
Resource:DNABASER
Resource:DNAPlotter Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/dnaplotter/ DNAPlotter.PNG
Resource:DOLINK http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:DONE: Detection of Outlier NEurons Newcastle University; Newcastle upon Tyne; United Kingdom http://www.biological-networks.org/p/outliers/
Resource:DPPH http://wwwcsif.cs.ucdavis.edu/~gusfield/dpph.html
Resource:DSpace Resource:DuraSpace http://www.dspace.org/ DSpace.PNG
Resource:DWI/DTI Quality Control Tool: DTIPrep https://github.com/hjmjohnson/DTIPrep
Resource:Dataverse Network Project Harvard University; Massachusetts; USA http://thedata.org/home
Resource:Datavyu New York University; New York; USA http://datavyu.org/ Datavyu.PNG
Resource:Db for Dummies! Custom Microsystems http://www.dbfordummies.com/ DBD.PNG
Resource:Debian Software in the public interest (SPI) http://www.debian.org Debian.PNG
Resource:DicomBrowser Washington University in St. Louis; Missouri; USA http://nrg.wustl.edu/software/dicom-browser/
Resource:DicomWorks http://www.softpedia.com/get/Science-CAD/DicomWorks.shtml
Resource:Diffusion Tractography with Kalman Filter Harvard Medical School; Massachusetts; USA http://www.nitrc.org/projects/ukftractography/
Resource:E-Prime Psychology Software Tools Inc. http://www.pstnet.com/eprime.cfm
Resource:E-Prime Extensions for fMRI Psychology Software Tools Inc. http://www.pstnet.com/software.cfm?ID=101
Resource:EAGLET http://www.columbia.edu/~ws2267/SOFT/EAGLET/eaglet.html
Resource:EASYLINKAGE/EASYLINKAGE-PLUS http://compbio.charite.de/genetik/hoffmann/easyLINKAGE/
Resource:EASYPOP http://www.unil.ch/dee/page36926_fr.html
Resource:ECLIPSE http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:EDAC http://www.biostat.wustl.edu/~gc/cgi-bin/calcpwr.cgi
Resource:EEProbe ANT Neuro http://www.ant-neuro.com/products/eeprobe
Resource:EH
Resource:EHAP http://wpicr.wpic.pitt.edu/WPICCompGen/ehap__v1.htm
Resource:EHP
Resource:EHPLUS http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software/
Resource:EIGENSOFT/EIGENSTRAT http://www.hsph.harvard.edu/faculty/alkes-price/software/
Resource:EM-DECODER http://www.people.fas.harvard.edu/~junliu/em/em.htm
Resource:EMLD http://epi.mdanderson.org/~qhuang/Software/pub.htm
Resource:ENDOG http://www.ucm.es/info/prodanim/html/JP_Web.htm
Resource:ENTROPY BLOCKER http://wpicr.wpic.pitt.edu/WPICCompGen/blocks.htm
Resource:EPDT http://www.ibms.sinica.edu.tw/~csjfann/first%20flow/programlist.htm
Resource:EPISTACY http://www4.ncsu.edu/~jholland/Epistacy/epistacy.htm
Resource:EQTL EXPLORER http://web.bioinformatics.ic.ac.uk/eqtlexplorer/
Resource:ERPA http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:ET-TDT http://www.stat.cmu.edu/~roeder/=ettdt/
Resource:ETDT http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:EVOKER http://www.sanger.ac.uk/resources/software/evoker/
Resource:EXOMEPICKS http://genome.sph.umich.edu/wiki/ExomePicks
Resource:EagleI Harvard University; Massachusetts; USA
Oregon Health and Science University; Oregon; USA
https://www.eagle-i.net/ Eagle-i.PNG
Resource:EarLab Boston University; Massachusetts; USA http://earlab.bu.edu/ EarLab.PNG
Resource:FAMHAP http://www.uni-bonn.de/~umt70e/becker.html
Resource:FAMOZ http://www.pierroton.inra.fr/genetics/labo/Software/Famoz/index.html
Resource:FASTEHPLUS http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software/
Resource:FASTER http://www.hoschl.cz/faster/
Resource:FASTLINK http://www.ncbi.nlm.nih.gov/CBBresearch/Schaffer/fastlink.html
Resource:FASTMAP (1) http://www.cs.cmu.edu/~genome/FAST-MAP.html
Resource:FASTMAP (2) http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:FASTSLINK http://watson.hgen.pitt.edu/register/soft_doc.html
Resource:FBAT http://www.biostat.harvard.edu/~fbat/fbat.htm
Resource:FBIRN Image Processing Scripts Resource:Function BIRN http://www.nitrc.org/projects/fips/
Resource:FEST
Resource:FESTA http://www.sph.umich.edu/csg/qin/FESTA/
Resource:FINESSE http://www.molecular-haplotype.org/finesse/finesse_intro.htm
Resource:FINETTI http://ihg.gsf.de/cgi-bin/hw/hwa1.pl (testing part)
Resource:FIRSTORD http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:FISHER registration page at: http://www.biomath.medsch.ucla.edu/faculty/klange/software.html
Resource:FLOSS http://faculty.washington.edu/browning/floss/floss.htm
Resource:FMRIpower University of California at Los Angeles; California; USA http://fmripower.org
Resource:FSST - Functional Similarity Search Tool Max-Planck-Institute for Informatics; Saarbrucken; Germany http://www.gotaxexplorer.de/ FSST.PNG
Resource:False Discovery Rate Weighted http://www.nitrc.org/projects/fdrw/
Resource:Fiber-tracking based on Finsler distance Resource:Finsler tractography module for Slicer http://www.nitrc.org/projects/finslerbacktr/
Resource:FiberViewerLight http://www.nitrc.org/projects/fvlight/
Resource:Finsler tractography module for Slicer http://www.nitrc.org/projects/finslertract/
Resource:G-MENDEL http://cropandsoil.oregonstate.edu/G-mendel
Resource:GAIA http://www.bbu.cf.ac.uk/html/research/biostats.htm
Resource:GAMBIT University of North Carolina at Chapel Hill; North Carolina; USA http://www.nitrc.org/projects/gambit/
Resource:GAP http://www.epicentersoftware.com/products.php
Resource:GAS http://users.ox.ac.uk/~ayoung/gas.html .
Resource:GAS2 http://www.bios.unc.edu/~lin/software/GAS2/
Resource:GASP http://www.nhgri.nih.gov/DIR/IDRB/GASP/
Resource:GASSOC http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm
Resource:GC/GCF http://wpicr.wpic.pitt.edu/WPICCompGen/genomic_control/genomic_control.htm
Resource:GCHAP http://episun7.med.utah.edu/~alun/gchap/index.html
Resource:GDA http://hydrodictyon.eeb.uconn.edu/people/plewis/software.php
Resource:GEMS http://statgen.genomecenter.howard.edu/gems.htm
Resource:GENECLASS http://www.montpellier.inra.fr/URLB/
Resource:GENECOUNTING http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software/
Resource:GENEFINDER http://www.biostat.jhsph.edu/~wmchen/gf.html
Resource:GENEHUNTER http://www.broad.mit.edu/ftp/distribution/software/genehunter/
Resource:GENEHUNTER SAD http://mlemire.freeshell.org/software.html
Resource:GENEHUNTER++SAD http://mlemire.freeshell.org/software.html
Resource:GENEHUNTER-IMPRINTING http://www.staff.uni-marburg.de/~strauchk/software.html
Resource:GENEHUNTER-MODSCORE http://www.staff.uni-marburg.de/~strauchk/software.html
Resource:GENEHUNTER-PLUS http://galton.uchicago.edu/genehunterplus
Resource:GENEHUNTER-TWOLOCUS http://www.staff.uni-marburg.de/~strauchk/software.html
Resource:GENEPI.JAR http://bioinformatics.med.utah.edu/~alun/software/index.html
Resource:GENEPOOL http://genepool.tgen.org/
Resource:GENEPOP http://wbiomed.curtin.edu.au/genepop/
Resource:GENERECON http://www.daimi.au.dk/~mailund/GeneRecon/
Resource:GENESPRING GT http://www.chem.agilent.com/scripts/pds.asp?lpage=34662
Resource:GENETIC POWER CALCULATOR http://pngu.mgh.harvard.edu/~purcell/gpc/
Resource:GENETSIM http://genetsim.org/
Resource:GENEVAR http://www.sanger.ac.uk/resources/software/genevar/
Resource:GENEWEAVER http://www.geneweaveronline.com/
Resource:GENIE http://bioinformatics.med.utah.edu/Genie/index.html
Resource:GENOCHECK http://softlib.rice.edu/geno.html
Resource:GENOGRAM-MAKER http://www.genogram.org/
Resource:GENOME http://www.sph.umich.edu/csg/liang/genome/
Resource:GENOMESIMLA http://chgr.mc.vanderbilt.edu/genomeSIMLA/
Resource:GENOMIZER http://www.ikmb.uni-kiel.de/genomizer/
Resource:GENOOM http://www.genoom.com/
Resource:GENOPROOF http://www.genoproof.com or http://qualitype.de/genoproof/
Resource:GENTOOLS http://www.genlink.wustl.edu/software/index.html
Resource:GERMLINE Columbia University; New York; USA http://www1.cs.columbia.edu/~gusev/germline/ GERMLINE.PNG
Resource:GEST http://lbm.ab.a.u-tokyo.ac.jp/~ukai/gest98.html
Resource:GEVALT http://acgt.cs.tau.ac.il/gevalt/
Resource:GGSD http://sourceforge.net/projects/ggsd/
Resource:GGT http://www.dpw.wau.nl/pv/PUB/ggt/
Resource:GHOST http://www.sph.umich.edu/csg/chen/ghost/
Resource:GIMIAS Pompeu Fabra University; Barcelona; Spain http://www.gimias.net/
Resource:GLFSINGLE/GLFTRIO/GLFMULTIPLES http://genome.sph.umich.edu/wiki/GlfSingle
Resource:GLIDERS http://mather.well.ox.ac.uk/GLIDERS/
Resource:GLUE http://portal.litbio.org/Registered/Webapp/glue/
Resource:GMA http://www.montana.edu/kalinowski/GMA/GMA_Home.htm
Resource:GMCHECK http://episun7.med.utah.edu/~alun/gmcheck/
Resource:GOblet Max Planck Institute for Molecular Genetics; Berlin; Germany http://goblet.molgen.mpg.de/cgi-bin/goblet2008/goblet.cgi GOblet.PNG
Resource:GREGOR http://gnome.agrenv.mcgill.ca/tinker/gregor.htm
Resource:GRIDQTL http://www.gridqtl.org.uk/
Resource:GRONLOD
Resource:GRR http://www.sph.umich.edu/csg/abecasis/GRR/
Resource:GS-EM http://www.people.fas.harvard.edu/~junliu/genotype/
Resource:GSMA http://mmg.umds.ac.uk/GSMA
Resource:GTOOL http://www.stats.ox.ac.uk/~marchini/software/gwas/gtool.html
Resource:GWAPOWER http://www.stats.ox.ac.uk/~marchini/software.html
Resource:GWASELECT http://www.bios.unc.edu/~lin/software/GWASelect/
Resource:GenGen Resource:OpenBioinformatics.org http://www.openbioinformatics.org/gengen/
Resource:Genboree Discovery System Baylor College of Medicine; Texas; USA http://genboree.org
Resource:GeneMerge Harvard University; Massachusetts; USA http://www.oeb.harvard.edu/faculty/hartl/old_site/lab/publications/GeneMerge.html GeneMerge.PNG
Resource:GeneNetworkBuilder Resource:Bioconductor http://www.bioconductor.org/packages/devel/bioc/html/GeneNetworkBuilder.html GeneNetworkBuilder.PNG
Resource:Genes to Cognition Online Resource:Cold Spring Harbor Laboratory http://www.g2conline.org/
Resource:Genotype-IBD Sharing Test Vanderbilt University; Tennessee; USA http://chgr.mc.vanderbilt.edu/page/gist GIST.PNG
Resource:Geriatric Depression Scale Resource:Stanford/VA Aging Clinical Research Center http://www.stanford.edu/~yesavage/GDS.html GDS.PNG
Resource:GoSurfer University of Illinois at Urbana-Champaign; Illinois; USA
Harvard School of Public Health; Massachusetts; USA
http://bioinformatics.bioen.illinois.edu/gosurfer/index.htm GoSurfer.PNG
Resource:Gradient Non-linearity Unwarping Tool Resource:Morphometry BIRN http://www.birncommunity.org/tools-catalog/gradient-non-linearity-distortion-correction/
Resource:Graphical Overview of Linkage Disequilibrium University of Michigan; Michigan; USA http://www.sph.umich.edu/csg/abecasis/GOLD/
Resource:HAP 1 http://research.calit2.net/hap/
Resource:HAP 2 http://www.mrc-epid.cam.ac.uk/Personal/jinghua.zhao/software/
Resource:HAP-SAMPLE http://www.hapsample.org/
Resource:HAPAR http://theory.stanford.edu/~xuying/hapar/
Resource:HAPASSOC
Resource:HAPBLOCK http://www-hto.usc.edu/msms/HapBlock/
Resource:HAPBLOCK 2 http://econpapers.repec.org/software/bocbocode/s438902.htm
Resource:HAPGEN http://www.stats.ox.ac.uk/~marchini/software/gwas/hapgen.html
Resource:HAPINFERX (temporary) source code , input example file , output example file
Resource:HAPLO 1 http://watson.hgen.pitt.edu/register/soft_doc.html,
Resource:HAPLO 2 http://krunch.med.yale.edu/haplo/
Resource:HAPLO.STAT http://mayoresearch.mayo.edu/mayo/research/biostat/schaid.cfm
Resource:HAPLOBLOCK http://bioinfo.cs.technion.ac.il/haploblock/
Resource:HAPLOBLOCKFINDER http://cgi.uc.edu/cgi-bin/kzhang/haploBlockFinder.cgi
Resource:HAPLOBUILD http://snp.bumc.bu.edu/modules.php?name=HaploBuild
Resource:HAPLOCLUSTERS http://bioinf.wehi.edu.au/folders/melanie/haploclusters.html
Resource:HAPLOPAINTER Resource:SourceForge http://haplopainter.sourceforge.net/ HaploPainter.PNG
Resource:HAPLOPOOL http://haplopool.icsi.berkeley.edu/haplopool/
Resource:HAPLORE http://bioinformatics.med.yale.edu/group/software.html
Resource:HAPLOREC http://www.cs.helsinki.fi/group/genetics/haplotyping.html
Resource:HAPLOT http://info.med.yale.edu/genetics/kkidd/programs.html
Resource:HAPLOTTER http://hg-wen.uchicago.edu/selection/haplotter.htm
Resource:HAPLOTYPE ESTIMATION http://www.bioinf.mdc-berlin.de/projects/hap/
Resource:HAPLOTYPER http://www.people.fas.harvard.edu/~junliu/Haplo/docMain.htm
Resource:HAPLOVISUAL http://www.cs.helsinki.fi/u/prastas/haplovisual/
Resource:HAPLOWSER http://embio.yonsei.ac.kr/haplowser/
Resource:HAPMINER http://vorlon.case.edu/~jxl175/HapMiner.html
Resource:HAPMIXMAP http://www.homepages.ed.ac.uk/pmckeigu/hapmixmap/hapmixmap_manual.html
Resource:HAPSCOPE http://lpg.nci.nih.gov/lpg_small/protocols/HapScope/
Resource:HAPSIMU http://l.web.umkc.edu/liujian/
Resource:HAPSTAT http://www.bios.unc.edu/~lin/hapstat/
Resource:HARDY http://www.stat.washington.edu/thompson/Genepi/Hardy.shtml
Resource:HCLUST http://wpicr.wpic.pitt.edu/WPICCompGen/hclust/hclust.htm
Resource:HEGESMA http://biomath.med.uth.gr
Resource:HELIXTREE http://www.goldenhelix.com/SNP_Variation/HelixTree
Resource:HIT http://www.cs.helsinki.fi/u/prastas/hit/
Resource:HOMOG/HOMOGM
Resource:HOTSPOTTER http://www.biostat.umn.edu/~nali/SoftwareListing.html
Resource:HPLUS http://cougar.fhcrc.org/hplus/
Resource:HS-TDT http://www.math.mtu.edu/~shuzhang/software.html
Resource:HTR http://statgen.ncsu.edu/zaykin/htr.html
Resource:HTSNPER http://www.chgb.org.cn/htSNPer/htSNPer.html
Resource:HWESTRATA http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm
Resource:HWMET http://www.reading.ac.uk/Statistics/genetics/software.html
Resource:Hanalyzer University of Colorado Denver; Colorado; USA
Resource:SourceForge
http://hanalyzer.sourceforge.net/
Resource:Hapmix Harvard Medical School; Massachusetts; USA http://genetics.med.harvard.edu/reich/Reich_Lab/Software.html HAPMIX.PNG
Resource:Hardy-Weinberg Equilibrium Calculator http://www.oege.org/software/hwe-mr-calc.shtml
Resource:Hitachi2nirs http://www.nitrc.org/projects/hitachi2nirs/
Resource:Human Protein-Protein Interaction Mining Tool Chinese Academy of Sciences; Beijing; China http://liweilab.genetics.ac.cn/tm/
Resource:IBDREG http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm
Resource:IGG http://bioinfo.hku.hk:13080/iggweb/
Resource:ILLUMINUS Wellcome Trust Sanger Institute; Hinxton; United Kingdom http://www.sanger.ac.uk/resources/software/illuminus/
Resource:ILR http://www.uni-bonn.de/~umt70e/soft.htm
Resource:IMPUTE https://mathgen.stats.ox.ac.uk/impute/impute.html
Resource:INSEGT http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:INTEGRAYEDMAP ftp://cggc.agtec.uga.edu/IntegratedMap/
Resource:INTERSNP http://intersnp.meb.uni-bonn.de/
Resource:IgBLAST Resource:NCBI http://www.ncbi.nlm.nih.gov/igblast/
Resource:Ingenuity Pathway Analysis Ingenuity Systems http://www.ingenuity.com/products/pathways_analysis.html
Resource:Integrated Content Environment University of Southern Queensland; Queensland; Australia http://www.usq.edu.au/lrds/tech/ice
Resource:J/QTL http://www.jax.org/staff/churchill/labsite/software/Jqtl/index.html
Resource:JENTI http://www.jenti.org
Resource:JLIN http://www.genepi.org.au/jlin
Resource:JOINMAP http://www.joinmap.nl/
Resource:JPSGCS http://balance.med.utah.edu/wiki/index.php/JPSGCS
Resource:KIN http://gnome.agrenv.mcgill.ca/tinker/kin.htm
Resource:KING
Resource:Karma University of Southern California; California; USA http://www.isi.edu/integration/karma/ Karma.PNG
Resource:KegTools Resource:KEGG http://www.kegg.jp/kegg/download/kegtools.html
Resource:Knowledge Engineering from Experimental Design Resource:Biomedical Informatics Research Network https://wiki.birncommunity.org/display/NEWBIRNCC/Knowledge+Engineering+from+Experimental+Design+%28%27KEfED%27%29 KEfED.PNG
Resource:L-POP http://statgen.iop.kcl.ac.uk/lpop/
Resource:LAMARC http://evolution.genetics.washington.edu/lamarc/lamarc_prog.html
Resource:LAMBDAA http://www.reading.ac.uk/Statistics/genetics/software.html
Resource:LAMP University of Michigan; Michigan; USA http://www.sph.umich.edu/csg/abecasis/LAMP/
Resource:LAPSTRUCT http://galton.uchicago.edu/~junzhang/LAPSTRUCT.html
Resource:LCP
Resource:LDA http://www.chgb.org.cn/lda/lda.htm
Resource:LDB/LDB+ http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/ldb;
Resource:LDDMM Johns Hopkins University; Maryland; USA http://cis.jhu.edu/software
Resource:LDGROUP http://www.fumihiko.takeuchi.name/publications.html
Resource:LDHAT http://www.stats.ox.ac.uk/~mcvean/LDhat/
Resource:LDHEATMAP
Resource:LDMAP http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/LDMAP
Resource:LDMET http://www.reading.ac.uk/Statistics/genetics/software.html
Resource:LDSELECT http://droog.gs.washington.edu/ldSelect.html
Resource:LDSUPPORT
Resource:LEA http://www.cnrs-gif.fr/pge/bioinfo/lea/index.php?lang=en
Resource:LINKAGE - CEPH
Resource:LINKAGE - general pedigrees
Resource:LINKAGE-IMPRINT https://epi.mdanderson.org/~xzhou/Software/Linkage_imprinting/
Resource:LINKBASE http://www.ktl.fi/molbio/software/linkbase/index.html
Resource:LIPED
Resource:LNKTOCRI http://compgen.rutgers.edu/multimap/
Resource:LOCUSMAP http://animalgene.umn.edu/locusmap/index.html
Resource:LOCUSZOOM http://genome.sph.umich.edu/wiki/LocusZoom
Resource:LOGINSERM ESTIHAPLO
Resource:LOH-LINKAGE http://www.bioinf.mdc-berlin.de/~rohde/
Resource:LOKI http://www.stat.washington.edu/thompson/Genepi/Loki.shtml
Resource:LONI De-identification Debablet Resource:Laboratory of Neuro Imaging http://www.loni.ucla.edu/Software/Software_Detail.jsp?software_id=23
Resource:LONI Debabeler Resource:Laboratory of Neuro Imaging http://www.loni.usc.edu/Software/Debabeler Debabeler.PNG
Resource:LONI Provenance Editor Resource:Laboratory of Neuro Imaging http://www.loni.usc.edu/Software/ProvenanceEditor
Resource:LONI Software Applications University of California at Los Angeles; California; USA http://www.loni.ucla.edu/Software/CCB/Type_Detail.jsp?type_id=1
Resource:LOT http://peace.med.yale.edu/pub/LOT/
Resource:LRP
Resource:LRTAE ftp://linkage.rockefeller.edu/software/lrtae/
Resource:LSP
Resource:LTSOFT http://www.hsph.harvard.edu/faculty/alkes-price/software/
Resource:MADELINE University of Michigan; Michigan; USA http://eyegene.ophthy.med.umich.edu/madeline/ Madeline.PNG
Resource:MADMAPPER http://www.atgc.org/XLinkage/MadMapper/
Resource:MAKEPED
Resource:MALDSOFT http://pritch.bsd.uchicago.edu/software/maldsoft_download.html
Resource:MAMA http://polymorphism.ucsd.edu/cgi-bin/PRL/mama/mama.cgi
Resource:MANTEL-STRUCT http://www.marksgeneticsoftware.net/
Resource:MAOS http://www.bios.unc.edu/~lin/software/MAOS/
Resource:MAP MANAGER QT http://www.mapmanager.org/mmQT.html
Resource:MAP MANAGER QTX http://www.mapmanager.org/mmQTX.html
Resource:MAP/MAP+/MAP+H/MAP2000 http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/map
Resource:MAPCHART http://www.biometris.wur.nl/uk/Software/MapChart/
Resource:MAPCREATOR http://www.wesbarris.com/mapcreator/
Resource:MAPDISTO http://mapdisto.free.fr/
Resource:MAPDRAW http://www.nslij-genetics.org/soft/mapdraw.v2.2.xls
Resource:MAPINSPECT http://www.dpw.wau.nl/pv/PUB/MapComp/
Resource:MAPL http://lbm.ab.a.u-tokyo.ac.jp/software.html
Resource:MAPMAKER/EXP http://www.broad.mit.edu/ftp/distribution/software/mapmaker3/
Resource:MAPMAKER/HOMOZ ftp://ftp-genome.wi.mit.edu/distribution/software/homoz
Resource:MAPMAKER/QTL http://www-genome.wi.mit.edu/genome_software
Resource:MAPMAKER/SIBS ftp://ftp-genome.wi.mit.edu/distribution/software/sibs
Resource:MAPPOP http://www.bio.unc.edu/faculty/vision/lab/mappop/
Resource:MAPQTL http://www.mapqtl.nl
Resource:MAREYMAP http://pbil.univ-lyon1.fr/software/mareymap/
Resource:MARGARITA http://www.sanger.ac.uk/resources/software/margarita/
Resource:MATLINK http://coding.plantpath.ksu.edu/~jcn/MatLink.html
Resource:MCLEEPS http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:MCQTL http://carlit.toulouse.inra.fr/MCQTL/
Resource:MDBLOCKS http://ib.berkeley.edu/labs/slatkin/eriq/software/mdb_web/
Resource:MDR http://www.multifactordimensionalityreduction.org/
Resource:MDR-PDT http://chgr.mc.vanderbilt.edu/ritchielab/method.php?method=mdrpdt
Resource:MECPM http://www.cbil.ece.vt.edu/ResearchOngoingSNP.htm
Resource:MEG Tools Henry Ford Hospital; Michigan; USA http://www.megimaging.com/
Resource:MEGA2 http://watson.hgen.pitt.edu/register/
Resource:MEGASNPHUNTER http://bioinformatics.ust.hk/MegaSNPHunter.html
Resource:MENDEL http://www.genetics.ucla.edu/software/
Resource:MENDELSOFT http://www.inra.fr/mia/T/MendelSoft/
Resource:MERLIN http://www.sph.umich.edu/csg/abecasis/Merlin
Resource:METAL University of Michigan; Michigan; USA http://www.sph.umich.edu/csg/abecasis/Metal/
Resource:MFLINK http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:MGA-MAPF2 http://mga.bionet.nsc.ru/soft/mgamapf2/
Resource:MIDAS http://www.genes.org.uk/software/midas
Resource:MILD http://www.geneticepi.com/Research/software/software.html
Resource:MINIMAC http://genome.sph.umich.edu/wiki/Minimac
Resource:MINSAGE http://www.imbs.uni-luebeck.de/pub/minsage/index.html
Resource:MITPENE http://mga.bionet.nsc.ru/soft/mitpene/mitpene.html (in Russian)
Resource:MIXSCORE http://www.hsph.harvard.edu/faculty/alkes-price/software/
Resource:MKGST http://www.uni-kiel.de/medinfo/mitarbeiter/krawczak/download/index.html
Resource:MLBGH ftp://ftp.biomath.jussieu.fr/pub/mlbgh (not available)
Resource:MLD ftp://statgen.ncsu.edu/pub/zaykin/
Resource:MLR-TAGGING http://alla.cs.gsu.edu/~software/tagging/tagging.html
Resource:MMDRAWER http://www.emboss.co.nz/products.php?pid=2
Resource:MOLKIN http://www.ucm.es/info/prodanim/html/JP_Web.htm
Resource:MORGAN University of Washington; Washington; USA http://www.stat.washington.edu/thompson/Genepi/MORGAN/Morgan.shtml MORGAN.PNG
Resource:MOSCPHASER http://emu.src.riken.jp/MOCSphase/MOSCphaser.zip
Resource:MPDA http://www.stat.sinica.edu.tw/hsinchou/genetics/pooledDNA/mpda.htm
Resource:MRH http://www-rcf.usc.edu/~gqian/software.htm (not available)
Resource:MULTIDISEQ http://www.helsinki.fi/~tsjuntun/multidiseq/
Resource:MULTIMAP http://compgen.rutgers.edu/Multimap/
Resource:MULTIMAPPER http://www.rni.helsinki.fi/~mjs/
Resource:MULTIMAPPER/OUTBRED http://www.rni.helsinki.fi/~mjs/
Resource:MULTIPOPTAGSELECT http://droog.gs.washington.edu/multiPopTagSelect.html
Resource:MULTIQTL http://www.multiqtl.com/
Resource:MULTISIM http://www.biology.duke.edu/noorlab/multsim.html
Resource:MUTAGENESYS http://magnet.c2b2.columbia.edu/mutagenesys/
Resource:MaCH-Admix University of North Carolina at Chapel Hill; North Carolina; USA http://www.unc.edu/~yunmli/MaCH-Admix/
Resource:Mach2dat University of Michigan; Michigan; USA http://genome.sph.umich.edu/wiki/Mach2dat:_Association_with_MACH_output
Resource:MapMan Max Planck Institute of Molecular Plant Physiology; Golm; Germany http://mapman.gabipd.org/web/guest/mapman MapMan.PNG
Resource:Marker And Gene Interpolation and Correlation King's College London; London; United Kingdom http://cogent.iop.kcl.ac.uk/MaGIC.cogx
Resource:MazeSuite Drexel University; Pennsylvania; USA http://www.mazesuite.com/
Resource:Mesh-based Monte Carlo (MMC) Resource:SourceForge http://mcx.sf.net/mmc/
Resource:Midas Platform Kitware http://www.midasplatform.org/ Midas.PNG
Resource:MoTrak Head Motion Tracking System Psychology Software Tools Inc. http://www.pstnet.com/software.cfm?ID=96
Resource:ModelGUI Wikidot http://mgui.wikidot.com
Resource:ModelMaker Resource:The Cromwell Workshop http://neuronalarchitects.com/model-maker.html ModelMaker.PNG
Resource:MultiTracer University of California at Los Angeles; California; USA
Resource:Laboratory of Neuro Imaging
http://air.bmap.ucla.edu/MultiTracer2/MultiTracer.html
Resource:Multipoint Identical-by-descent Method ftp://morgan.med.utah.edu/pub/Mim
Resource:NCI Flicker Web Server. National Cancer Institute http://www-lecb.ncifcrf.gov/NCISEM97/ncisem18.html
Resource:NFT Resource:Swartz Center for Computational Neuroscience http://sccn.ucsd.edu/wiki/NFT
Resource:NGS-Cleaner Resource:SourceForge http://sourceforge.net/projects/ngs-cleaner/
Resource:NIRx NIRS Neuroimaging NIRx Medical Technologies LLC http://www.nirx.net
Resource:NIRx2nirs: A NIRx to .nirs data converter http://www.nitrc.org/projects/nirx2nirs/
Resource:NOCOM
Resource:NOPAR http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/nopar
Resource:NSeq Resource:GitHub https://github.com/songlab/NSeq
Resource:NUCULAR http://mlemire.freeshell.org/software.html
Resource:NVM Resource:Neuromorphometrics http://neuromorphometrics.org:8080/nvm/index.html NVM.PNG
Resource:Net Station EEG Software Electrical Geodesics Inc. http://www.egi.com/research-division-geodesic-system-components/eeg-software
Resource:NetNGlyc Resource:CBS Prediction Servers http://www.cbs.dtu.dk/services/NetNGlyc/ NetNGlyc.PNG
Resource:NetOGlyc Resource:CBS Prediction Servers http://www.cbs.dtu.dk/services/NetOGlyc/ NetOGlyc.PNG
Resource:Neural Maestro Resource:The Cromwell Workshop http://neuronalarchitects.com/index.html Neural Maestro.PNG
Resource:Nipype Resource:Neuroimaging in Python http://nipy.org/nipype/
Resource:NordicNeuroLab http://www.nordicneurolab.com
Resource:OBO-Edit Resource:GO http://oboedit.org/ OBO-Edit.PNG
Resource:OLORIN Wellcome Trust Sanger Institute; Hinxton; United Kingdom
Resource:SourceForge
http://www.sanger.ac.uk/resources/software/olorin/
Resource:ONEMAP
Resource:OSA Duke University; North Carolina; USA http://wwwchg.duhs.duke.edu/research/osa.html
Resource:OSIRIS http://ibi.imim.es/osirisform.html
Resource:Object-Oriented Development Interface for NMR Resource:SourceForge http://od1n.sourceforge.net
Resource:OpenMEEG National Institute for Research in Computer Science and Control; Brittany; France http://openmeeg.gforge.inria.fr
Resource:Optseq - fMRI Event Scheduler Massachusetts General Hospital; Massachusetts; USA http://surfer.nmr.mgh.harvard.edu/optseq/ Optseq.PNG
Resource:P ACT http://csg.sph.umich.edu/boehnke/p_act.php
Resource:PANGAEA http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:PAP http://hasstedt.genetics.utah.edu/
Resource:PARENTE http://www2.ujf-grenoble.fr/leca/membres/manel.html
Resource:PASS PEDIGREE http://www.pass-software.com/Producten/PASSPedigree.aspx (in Dutch)
Resource:PATH http://genapha.icapture.ubc.ca/PathTutorial/
Resource:PAWE http://linkage.rockefeller.edu/pawe/
Resource:PAWE-3D http://linkage.rockefeller.edu/pawe3d/
Resource:PBAT http://www.biostat.harvard.edu/~clange/default.htm
Resource:PDA http://www.ibms.sinica.edu.tw/~csjfann/first%20flow/programlist.htm
Resource:PDPSYS http://cougar.fhcrc.org/software.php
Resource:PDT http://www.chg.duke.edu/software/pdt.html
Resource:PED http://www.medgen.de/index.html
Resource:PEDAGREE http://pedagree.free.fr/
Resource:PEDCHECK http://watson.hgen.pitt.edu/register
Resource:PEDFIDDLER http://www.stat.washington.edu/thompson/Genepi/Pedfiddler.shtml
Resource:PEDHUNTER Resource:NCBI http://www.ncbi.nlm.nih.gov/CBBresearch/Schaffer/pedhunter.html PedHunter.PNG
Resource:PEDIGRAPH University of Minnesota Twin Cities; Minnesota; USA http://animalgene.umn.edu/pedigraph/ Pedigraph.PNG
Resource:PEDIGREE-VISUALIZER http://research.i2r.a-star.edu.sg:8080/kleisli/demos/pedigree/
Resource:PEDIGREE/DRAW http://www.pedigree-draw.com/
Resource:PEDIGREEQUERY http://mga.bionet.nsc.ru/soft/index.html
Resource:PEDJAVA http://cooke.gsf.de/wjst/download.cfm
Resource:PEDMANAGER http://www-genome.wi.mit.edu/ftp/distribution/software/pedmanager/
Resource:PEDPACK http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml
Resource:PEDPEEL http://mga.bionet.nsc.ru/soft/pedpeel/
Resource:PEDPHASE http://vorlon.case.edu/~jxl175/haplotyping.html
Resource:PEDPLOT http://www.chg.duke.edu/software/pedplot.html
Resource:PEDRAW/WPEDRAW http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:PEDSCRIPT http://genome.sph.umich.edu/wiki/PedScript
Resource:PEDSTATS http://www.sph.umich.edu/csg/abecasis/Pedstats/
Resource:PEDSYS http://www.sfbr.org/sfbr/public/software/pedsys/pedsys.html
Resource:PEDVIZAPI http://www.pedvizapi.org/
Resource:PEER http://www.sanger.ac.uk/resources/software/peer/
Resource:PELICAN Resource:Google Sites https://sites.google.com/site/fdudbridge/software/pelican
Resource:PESTICA fMRI Physio Detection/Correction http://www.nitrc.org/projects/pestica/
Resource:PHASE http://www.stat.washington.edu/stephens/software.html
Resource:PIAGE http://www.dkfz.de/en/epidemiologie-krebserkrankungen/software/software.html
Resource:PL-EM http://www.people.fas.harvard.edu/~junliu/plem/
Resource:PLABQTL https://www.uni-hohenheim.de/plantbreeding/software/
Resource:PLABSIM http://www.uni-hohenheim.de/~frisch/software.html
Resource:PLAYPUS http://www.well.ox.ac.uk/platypus
Resource:PLINK/SEQ http://atgu.mgh.harvard.edu/plinkseq/
Resource:POINTER http://cedar.genetics.soton.ac.uk/pub/PROGRAMS/pointer
Resource:POLYMORPHISM
Resource:POLYMUTT University of Michigan; Michigan; USA http://genome.sph.umich.edu/wiki/Polymutt Polymutt.PNG
Resource:POLYPHEN http://genetics.bwh.harvard.edu/pph2/ (POLYPHEN-2)
Resource:POOL STR http://www.geneticepi.com/Research/software/software.html
Resource:POOLSCORE http://www.homepages.ed.ac.uk/pmckeigu/pooling/poolscore.htm
Resource:POPDIST http://genetics.agrsci.dk/~bg/popgen/
Resource:POPGEN http://www.stats.ox.ac.uk/mathgen/software.html
Resource:POWER http://dceg.cancer.gov/POWER/
Resource:POWERMARKER http://statgen.ncsu.edu/powermarker/
Resource:POWERTRIM http://phg.mc.vanderbilt.edu/content/powertrim
Resource:POWQ http://www.twin-research.ac.uk/WebPowQ/PowQ.htm
Resource:POWTEST http://www.mds.qmw.ac.uk/statgen/dcurtis/software.html
Resource:PREPLINK
Resource:PREST http://fisher.utstat.toronto.edu/sun/Software/Prest or previously, http://galton.uchicago.edu/~mcpeek/software/prest
Resource:PRESTO http://faculty.washington.edu/browning/presto/presto.html
Resource:PROBMAX http://www.uoguelph.ca/~rdanzman/software/PROBMAX/
Resource:PROC QTL http://www.statgen.ucr.edu/software.html
Resource:PROFILER http://www.molecular-haplotype.org/profiler/profiler_intro.htm
Resource:PRT http://www.urmc.rochester.edu/smd/biostat/Projects/Help/PC/Software_Listings.htm
Resource:PSAT http://acgt.cs.tau.ac.il/psat/
Resource:PSEUDO University of Michigan; Michigan; USA http://www.sph.umich.edu/csg/abecasis/pseudo/download
Resource:PSEUDOMARKER http://www.helsinki.fi/~tsjuntun/pseudomarker/
Resource:PSEUDOMARKER.M http://www.jax.org/staff/churchill/labsite/software/pseudomarker/index.html
Resource:PYPOP http://www.pypop.org/
Resource:Paradigm Perception Research Systems Incorporated http://www.paradigmexperiments.com
Resource:PhenoFam Resource:SourceForge http://sourceforge.net/projects/phenofam/
Resource:PhenoTips University of Toronto; Ontario; Canada http://phenotips.cs.toronto.edu/ PhenoTips.PNG
Resource:Power Atlas University of Alabama at Birmingham; Alabama; USA http://www.poweratlas.org/
Resource:Presentation Neurobehavioral Systems Inc. http://www.neurobs.com/
Resource:PsychoPy University of Nottingham; Nottingham; United Kingdom http://www.psychopy.org
Resource:Publish or perish Harzing.com http://www.harzing.com/pop.htm Publish or Perish.PNG
Resource:PyMVPA Dartmouth College; New Hampshire; USA
Otto-von-Guericke University Magdeburg; Saxony-Anhalt; Germany
http://www.pymvpa.org PyMVPA.PNG
Resource:Pythonxy Resource:Google App Engine https://code.google.com/p/pythonxy/wiki/Welcome Pythonxy.PNG
Resource:QMSIM http://www.aps.uoguelph.ca/~msargol/qmsim/
Resource:QTDT http://www.sph.umich.edu/csg/abecasis/QTDT/
Resource:QTL CAFE http://www.biosciences-labs.bham.ac.uk/Kearsey/
Resource:QTL Cartographer http://statgen.ncsu.edu/qtlcart/cartographer.html
Resource:QTL EXPRESS http://qtl.cap.ed.ac.uk/
Resource:QTL-ALL http://watson.hgen.pitt.edu/register/
Resource:QTLNETWORK http://ibi.zju.edu.cn/software/qtlnetwork
Resource:QU-GENE http://pig.ag.uq.edu.au/qu-gene/ (not available)
Resource:QUANTO http://hydra.usc.edu/GxE
Resource:QUTIE http://www.sanger.ac.uk/resources/software/rarevariant/
Resource:R/ADEGENET http://adegenet.r-forge.r-project.org/
Resource:R/ARP.GEE
Resource:R/BARS
Resource:R/COMPOSITELD
Resource:R/COVIBD
Resource:R/EHP
Resource:R/ENTROPY BLOCKER
Resource:R/FEST http://folk.uio.no/thoree/FEST/
Resource:R/GAP http://www.mrc-epid.cam.ac.uk/~jinghua.zhao/r-progs.htm
Resource:R/GC, R/GCF
Resource:R/GWAPOWER
Resource:R/HAPASSOC http://stat-db.stat.sfu.ca:8080/statgen/research/hapassoc
Resource:R/HCLUST
Resource:R/IBDREG
Resource:R/LAPSTRUCT
Resource:R/LDGROUP
Resource:R/LDHEATMAP http://stat-db.stat.sfu.ca:8080/statgen/research/LDheatmap
Resource:R/LUCA http://stat-db.stat.sfu.ca:8080/statgen/research/luca/
Resource:R/META http://cran.r-project.org/web/packages/meta/index.html
Resource:R/METASIM http://linum.cofc.edu/software.html
Resource:R/ONEMAP http://www.ciagri.usp.br/~aafgarci/OneMap/
Resource:R/PIAGE
Resource:R/POOLSCORE
Resource:R/POPGEN
Resource:R/QTL http://www.rqtl.org
Resource:R/QTLBIM http://www.qtlbim.org/
Resource:R/QTLDESIGN http://www.epibiostat.ucsf.edu/biostat/sen/qtldesign-software/
Resource:R/SNP.PLOTTER http://cbdb.nimh.nih.gov/~kristin/snp.plotter.html
Resource:R/SPECTRAL-GEM http://wpicr.wpic.pitt.edu/WPICCompGen/
Resource:R/STEPWISE http://stat-db.stat.sfu.ca:8080/statgen/research/stepwise/
Resource:R/TDTHAP http://www-gene.cimr.cam.ac.uk/clayton/software/
Resource:R/WEIGHTED FDR
Resource:RC-TDT http://www.uni-bonn.de/~umt70e/soft.htm
Resource:REAPER University of Tartu; Tartu; Estonia http://bioinfo.ebc.ee/download/
Resource:RECORD http://www.plantbreeding.wur.nl/UK/software_record.html
Resource:RELATIVE ftp://linkage.rockefeller.edu/software/relative
Resource:RELATIVEFINDER http://genome.sph.umich.edu/wiki/RelativeFinder
Resource:RELCHECK http://www.biostat.jhsph.edu/~kbroman/software/
Resource:RELPAIR http://csg.sph.umich.edu/boehnke/relpair.php
Resource:RELTYPE http://hgc.sph.uth.tmc.edu (not available yet)
Resource:RFT FDR http://www.nitrc.org/projects/rft_fdr/
Resource:RHMAP http://csg.sph.umich.edu/boehnke/rhmap.php
Resource:RHMAPPER http://www-genome.wi.mit.edu/ftp/pub/software/rhmapper/
Resource:RISCALW http://www.riscalw.uni-hd.de
Resource:ROMPREV http://research.nhgri.nih.gov/ROMPrev/
Resource:ROSATTA SYLLEGO SYSTEM
Resource:RTDT http://bios.ugr.es/~mabad/rTDT/index.html
Resource:RVTESTS http://genome.sph.umich.edu/wiki/RvTests
Resource:RightField University of Manchester; Manchester; United Kingdom
Heidelberg Institute for Theoretical Studies; Heidelberg; Germany
http://www.rightfield.org.uk/ RightField.PNG
Resource:S
Resource:SAGE http://darwin.cwru.edu/sage/
Resource:SAS/GENETICS
Resource:SASGENE http://cuke.hort.ncsu.edu/cucurbit/wehner/software.html
Resource:SASQUANT http://cuke.hort.ncsu.edu/cucurbit/wehner/software.html
Resource:SCORE-SEQ http://www.bios.unc.edu/~lin/software/SCORE-Seq/
Resource:SCOUT http://www.genetics.emory.edu/labs/epstein/software/scout/index.html
Resource:SDMINP http://www.dkfz.de/SDMinP/
Resource:SEGPATH http://www.biostat.wustl.edu/~mike/segpath/
Resource:SELSIM http://www.stats.ox.ac.uk/mathgen/software.html
Resource:SEQUENCE LD/SEQUENCE LDHOT http://www.maths.lancs.ac.uk/~fearnhea/Software.html
Resource:SET National Yang-Ming University; Taipei; Taiwan http://microarray.ym.edu.tw:8080/tools/module/set/index.jsp?mode=home
Resource:SGS http://software.bfh-inst2.de/download3.html
Resource:SHRINE Harvard Medical School; Massachusetts; USA https://open.med.harvard.edu/display/SHRINE/Community SHRINE.PNG
Resource:SIB-PAIR http://www2.qimr.edu.au/davidD
Resource:SIBERROR
Resource:SIBLINK http://wwwchg.duhs.duke.edu/software/siblink.html
Resource:SIBMED http://csg.sph.umich.edu/boehnke/sibmed.php
Resource:SIBSIM http://www.imbs.uni-luebeck.de/pub/sibsim/index.html
Resource:SILCLOD http://www.imbs.uni-luebeck.de/pub/silcLOD/index.html
Resource:SIMCOAL http://cmpg.unibe.ch/software/simcoal/
Resource:SIMHAP University of Western Australia; Perth; Australia http://www.gohad.uwa.edu.au/software/simhap SimHap.PNG
Resource:SIMIBD http://watson.hgen.pitt.edu/register/soft_doc.html, http://watson.hgen.pitt.edu/~davis/
Resource:SIMLA http://wwwchg.duhs.duke.edu/software/simla.html
Resource:SIMLINK http://csg.sph.umich.edu/boehnke/simlink.php
Resource:SIMM http://mlemire.freeshell.org/software.html
Resource:SIMPED http://www.hgsc.bcm.tmc.edu/genemapping
Resource:SIMPLE http://www.stat.ohio-state.edu/~statgen/SOFTWARE/SIMPLE/
Resource:SIMULA http://www.chg.duke.edu/research/simla30.html
Resource:SIMULAPLOT http://www.chg.duke.edu/research/simlaplot.html
Resource:SIMULATE
Resource:SIMUPOP http://bp6.stat.rice.edu:8080/simuPOP/
Resource:SIMWALK http://www.genetics.ucla.edu/software/simwalk
Resource:SKAT http://www.hsph.harvard.edu/research/skat/index.html
Resource:SLINK
Resource:SMOOTH http://www.plantbreeding.wur.nl/UK/software_smooth.html
Resource:SNAP - SNP Annotation and Proxy Search Resource:Broad Institute http://www.broadinstitute.org/mpg/snap/ SNP Annotation and Proxy Search.PNG
Resource:SNAP 3 http://capella.uni-kiel.de/snap/snap.htm
Resource:SNIPPEEP http://snippeep.sourceforge.net/
Resource:SNP ASSISTANT http://www.biodata.ee/SNPassistant.htm (30 days trial version)
Resource:SNP CHART http://www.flintbox.com/public/project/500/
Resource:SNP HITLINK http://www.dynacom.co.jp/u-tokyo.ac.jp/snphitlink/
Resource:SNP-HWE http://www.sph.umich.edu/csg/abecasis/Exact/index.html
Resource:SNP.PLOTTER
Resource:SNPALYZE http://www.dynacom.co.jp/e/products/package/snpalyze/index.html
Resource:SNPEM http://polymorphism.ucsd.edu/snpem/
Resource:SNPFILE http://www.daimi.au.dk/~mailund/SNPFile/
Resource:SNPHAP http://www-gene.cimr.cam.ac.uk/clayton/software/
Resource:SNPHARVESTER http://bioinformatics.ust.hk/SNPHarvester.html
Resource:SNPLINK http://www.icr.ac.uk/cancgen/molgen/MolPopGen_Bioinformatics.htm
Resource:SNPMSTAT http://www.bios.unc.edu/~lin/software/SNPMStat/
Resource:SNPP http://orclinux.creighton.edu/snpp/
Resource:SNPTEST http://www.stats.ox.ac.uk/~marchini/software/gwas/snptest.html
Resource:SOLAR http://www.sfbr.org/Departments/genetics_detail.aspx?p=37
Resource:SPAM http://www.genetics.cf.adfg.state.ak.us/software/spampage.php
Resource:SPECTRAL-GEM
Resource:SPERM registration page at: http://www.biomath.medsch.ucla.edu/faculty/klange/software.html
Resource:SPERMSEG http://galton.uchicago.edu/~mcpeek/software/spermseg
Resource:SPHARM-MAT Indiana University School of Medicine; Indiana; USA http://imaging.indyrad.iupui.edu/projects/SPHARM/
Resource:SPHARM-PDM Toolbox Resource:National Alliance for Medical Image Computing
University of North Carolina at Chapel Hill; North Carolina; USA
http://www.na-mic.org/Wiki/index.php/UNC_SPHARM-PDM_Tutorial
Resource:SPIP http://swfsc.noaa.gov/staff.aspx?id=740
Resource:SPLAT http://www.joslinresearch.org/LabSites/Krolewski/splat/
Resource:SPLINK http://www-gene.cimr.cam.ac.uk/clayton/software/
Resource:SPREG http://www.bios.unc.edu/~lin/software/SPREG/
Resource:SQTDT/SPDT http://www.bios.unc.edu/~lin/software/SQTDT/
Resource:SQTL http://www.bios.unc.edu/~lin/software/SQTL/
Resource:SSAHASNP http://www.sanger.ac.uk/resources/software/ssahasnp/
Resource:STAPLE Harvard Medical School; Massachusetts; USA http://www.crl.med.harvard.edu/software/STAPLE/index.php
Resource:START http://www.stat.ohio-state.edu/~statgen/SOFTWARE/START/
Resource:STEPC http://hg-wen.uchicago.edu/software.html
Resource:STEPWISE
Resource:STRAT http://pritchardlab.stanford.edu/software.html
Resource:STRUCTURE Stanford University; California; USA http://pritchardlab.stanford.edu/structure.html
Resource:SUMSTAT
Resource:SUP http://mlemire.freeshell.org/software.html
Resource:SUPERLINK http://bioinfo.cs.technion.ac.il/superlink/
Resource:SVA Duke University School of Medicine; North Carolina; USA
Omics Express
http://www.omicsexpress.com/sva.php SVA.PNG
Resource:SVCC http://www.bios.unc.edu/~lin/software/SVCC/
Resource:SWEEP http://www.broad.mit.edu/mpg/sweep/
Resource:SYZYGY Resource:Broad Institute http://www.broadinstitute.org/software/syzygy/ Syzygy.PNG
Resource:Sapienta ART project http://www.sapientaproject.com/ SAPIENTA.PNG
Resource:Scalable Brain Atlas Resource:International Neuroinformatics Coordinating Facility http://scalablebrainatlas.incf.org/ SBA.PNG
Resource:Segmentation Validation Engine University of California at Los Angeles; California; USA http://sve.bmap.ucla.edu/
Resource:ShapeComplexAtlas University of Florida; Florida; USA http://www.cise.ufl.edu/~tichen/ShapeComplexAtlas.zip
Resource:ShapeWorks University of Utah; Utah; USA http://www.sci.utah.edu/cibc/software/131-shapeworks.html
Resource:Shiny Resource:RStudio http://www.rstudio.com/shiny/ Shiny.PNG
Resource:Show of Hands http://www.scienceexchange.com/facilities/show-of-hands-mobile-polling
Resource:Sleuth Resource:brainmap.org http://brainmap.org/sleuth/
Resource:Slicer3 Example Modules http://www.nitrc.org/projects/slicer3examples/
Resource:Solar Eclipse Imaging Genetics tools http://www.nitrc.org/projects/se_linux/
Resource:Source Information Flow Toolbox Resource:Swartz Center for Computational Neuroscience http://sccn.ucsd.edu/wiki/SIFT
Resource:Spatial Analysis 3D University of California at Santa Barbara; California; USA http://labs.nri.ucsb.edu/reese/benjamin/SA3D.html
Resource:Statistics Online Computational Resource University of California at Los Angeles; California; USA http://www.socr.ucla.edu/ SOCR.PNG
Resource:Substructure Index-based Approximate Graph Alignment Resource:National Center for Integrative Biomedical Informatics
University of Michigan; Michigan; USA
http://portal.ncibi.org/gateway/saga.html SAGA.PNG
Resource:Suite of Nucleotide Analysis Programs http://www.cals.ncsu.edu/plantpath/people/faculty/carbone/snap.html
Resource:TAGGER http://www.broad.mit.edu/mpg/tagger/
Resource:TAGIMPUTE http://www.bios.unc.edu/~lin/software/tagIMPUTE/
Resource:TAGSNP http://www-rcf.usc.edu/~stram/tagSNPs.html
Resource:TAGSTER http://www.niehs.nih.gov/research/resources/software/tagster/
Resource:TARGETgene Resource:Biomedical Simulations Resource http://bmsr.usc.edu/software/targetgene/ TARGETgene.PNG
Resource:TARQUIN Resource:SourceForge http://tarquin.sourceforge.net/
Resource:TASSEL http://sourceforge.net/projects/tassel/
Resource:TDT-AE ftp://linkage.rockefeller.edu/software/tdtae2
Resource:TDT-PC http://people.virginia.edu/~wc9c/TDTPC/Download.htm
Resource:TDT/S-TDT http://genomics.med.upenn.edu/spielman/TDT.htm
Resource:TDTASP http://biostatistics.mdanderson.org/SoftwareDownload/
Resource:TDTHAP
Resource:TDTPOWER http://www.uni-bonn.de/~umt70e/soft.htm
Resource:TFPGA http://www.marksgeneticsoftware.net/
Resource:THESIAS http://ecgene.net/genecanvas/downloads.php?cat_id=1
Resource:THOR Center for Neuroinformatics Technical University of Denmark; Lyngby; Denmark http://isp.imm.dtu.dk/thor/ THOR Center.PNG
Resource:TKMAP http://www.hpcf.upr.edu/~humberto/software/TkMap/
Resource:TLINKAGE
Resource:TOMCAT http://www.dkfz.de/en/epidemiologie-krebserkrankungen/software/software.html
Resource:TRANSMIT http://www-gene.cimr.cam.ac.uk/clayton/software/
Resource:TRAP http://research.nhgri.nih.gov/software/TRAP/
Resource:TREELD http://pritch.bsd.uchicago.edu/treeld.html
Resource:TREESCAN http://darwin.uvigo.es/software/treescan.html
Resource:TREESELECT http://www.hsph.harvard.edu/faculty/alkes-price/software/
Resource:TRIMHAP http://www.vipbg.vcu.edu/trimhap/
Resource:TUNA http://www.stat.uchicago.edu/~wen/tuna/
Resource:TWOLOC http://www.well.ox.ac.uk/~mfarrall/twoloc.htm
Resource:TheDataWeb and DataFerrett U.S. Census Bureau http://dataferrett.census.gov DataFerrett.PNG
Resource:TraDES Resource:Christopher Hogues Research Lab at the National University of Singapore https://sites.google.com/a/blueprint.org/trades/ TraDES.PNG
Resource:TractoR: Tractography with R University College London; London; United Kingdom http://www.tractor-mri.org.uk/
Resource:UMAKE http://genome.sph.umich.edu/wiki/UMAKE
Resource:UNAFold University at Albany; New York; USA http://mfold.rna.albany.edu/
Resource:UNKNOWN
Resource:UNPHASED http://www.mrc-bsu.cam.ac.uk/personal/frank/software/unphased/
Resource:UTIL
Resource:Utopia Documents University of Manchester; Manchester; United Kingdom http://utopiadocs.com/documents/ Utopia.PNG
Resource:VAAST Resource:Yandell Lab Portal
Omicia
http://www.yandell-lab.org/software/vaast.html VAAST.PNG
Resource:VARSCAN Resource:SourceForge
Washington University in St. Louis; Missouri; USA
http://varscan.sourceforge.net/ VarScan.PNG
Resource:VG http://pga.gs.washington.edu/VG2.html
Resource:VH http://pga.gs.washington.edu/VH1.html
Resource:VITESSE http://watson.hgen.pitt.edu/register/soft_doc.html,
Resource:VIVO University of Florida; Florida; USA http://vivoweb.org/ VIVO.PNG
Resource:VR Worlds 2 Psychology Software Tools Inc. http://www.pstnet.com/software.cfm?ID=94
Resource:Vascular Modeling Toolkit http://www.vmtk.org/ VMTK.PNG
Resource:WEBQTL http://www.webqtl.org/search.html
Resource:WEIGHTED FDR http://wpicr.wpic.pitt.edu/WPICCompGen/fdr/
Resource:WHAIT http://www.sph.umich.edu/csg/yli/whait/
Resource:WHICHRUN http://www.bml.ucdavis.edu/whichrun.htm
Resource:Wandora Grip Studios Interactive http://www.wandora.org/wandora/wiki/index.php?title=Main_Page Wandora.PNG
Resource:WebImageBrowser Resource:Cell Centered Database http://openccdb-dev-web.crbs.ucsd.edu/software/index.shtm WIB.PNG
Resource:Whap Massachusetts General Hospital; Massachusetts; USA http://pngu.mgh.harvard.edu/purcell/whap/
Resource:Wolfram Alpha Computational Knowledge Engine http://www.wolframalpha.com/
Resource:Working Memory Trainer http://www.nitrc.org/projects/wmtrainer/
Resource:Xournal Resource:SourceForge http://xournal.sourceforge.net/ Xournal.PNG
Resource:YinOYang Resource:CBS Prediction Servers http://www.cbs.dtu.dk/services/YinOYang/ YinOYang.PNG
Resource:Yogo Data Management System Montana State University; Montana; USA http://yogo.msu.montana.edu/
Resource:ZAPLO http://www.molecular-haplotype.org/zaplo/zaplo_index.html
Resource:brainmap.org University of Texas Health Science Center at San Antonio; Texas; USA http://brainmap.org/ BrainMap.PNG
Resource:caTRIP Resource:Cancer Biomedical Informatics Grid https://cabig.nci.nih.gov/tools/caTRIP CaTRIP.PNG
Resource:cortex Resource:Brain Research Institute https://sites.google.com/a/brain.org.au/ctp/
Resource:dinifti New York University; New York; USA http://cbi.nyu.edu/software/dinifti.php
Resource:eCAT electronic lab notebook Axiope Limited http://www.axiope.com/electronic-lab-notebook
Resource:eNeoTutor Resource:The Cromwell Workshop http://neuronalarchitects.com/eneotutor.html ENeoTutor.PNG
Resource:fMRI Artefact rejection and Sleep Scoring Toolbox University of Liege; Wallonia; Belgium http://www.montefiore.ulg.ac.be/~phillips/FASST.html
Resource:fMRI-CPCA http://www.nitrc.org/projects/fmricpca/
Resource:iBIOFind Resource:The Cromwell Workshop http://neuronalarchitects.com/ibiofind.html IBIOFind.PNG
Resource:imcalc: SPM batch image calulator National University of Singapore; Singapore; Singapore http://tools.robjellis.net/
Resource:iso2mesh Resource:SourceForge http://iso2mesh.sourceforge.net/
Resource:neurodebian Resource:Debian
Dartmouth College; New Hampshire; USA
Otto-von-Guericke University Magdeburg; Saxony-Anhalt; Germany
http://neuro.debian.net/ NeuroDebian.PNG
Resource:scikit-learn http://scikit-learn.org/
Resource:scrible http://www.scrible.com/#desktop Scrible.PNG
Resource:shapeAnalysisMANCOVA - SPHARM tools University of North Carolina at Chapel Hill; North Carolina; USA http://www.nitrc.org/projects/shape_mancova/
Resource:signalml.org University of Warsaw; Warsaw; Poland http://signalml.org/
Resource:splitneuron MindUpload http://www.mindupload.org/index.php?tab=2&sub=0

Contributors

Aarnaud, Memartone, Nifbot2, Totsui



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Facts about Software applicationRDF feed
CurationStatusuncurated  +
DefinitionBinary executable is a digital entity cons Binary executable is a digital entity consisting of the binary representation of machine instructions of a specific processor or they may be binary pseudocode for a virtual machine. A non-source executable file is also called an object program. It is assumed that the binary executable file contains properly-formatted computer instructions. (derived from Wikipedia, Nov 1, 2007) NITRC definition: Software programs designed to run on a computer. re programs designed to run on a computer.
Idbirnlex_11012  +
LabelSoftware application  +
ModifiedDate17 January 2013  +
SuperCategorySoftware resource  +
SynonymApplication  +, Binary executable  +, and Software program  +