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Definition Synonym Comment
3D T1 Weighted Scan
Abstract
Acceleration factor
Access resistance Sum of the electrode resistance and the resistance at the electrode-cell junction access_resistance
series_resistance
NeuroElectro Term 12
Accession number Accession
Affective neuroscience Branch of neuroscience involving the study of the neural mechanisms of emotion. This interdisciplinary field combines neuroscience with the psychological study of personality, emotion, and mood. - definition adapted from Wikipedia
Algorithm an algorithm is a plan which describes inputs, output of mathematical functions as well as workflow of execution for achieving an predefined objective. Algorithms are realized usually by means of implementation as computer programs for execution by automata.
Alternative title alt title
secondary title
Amperometric electrode recording protocol
Anatomical pathology Branch of pathology.
Anatomy branch of biology and Medicine that studies primarily the internal structure and design of the structure of living things.

It is a general term that includes human anatomy, animal anatomy (zootomy) and plant anatomy (phytotomy). Anatomy is divided into various sub specialties in some of its facets anatomy is closely related to Embryology, Histology, comparative anatomy and comparative embryology, through common roots in evolution.

Anatomy is subdivided into gross anatomy (or macroscopic anatomy) and microscopic anatomy. Gross anatomy (also called topographical anatomy, regional anatomy, or anthropotomy) is the study of anatomical structures that can be seen by unaided vision with the naked eye. Microscopic anatomy is the study of minute anatomical structures assisted with microscopes, which includes histology (the study of the organization of tissues), and cytology (the study of cells).

The history of anatomy has been characterized, over time, by a continually developing understanding of the functions of organs and structures in the body including the clinical understanding of how damage to these structures effects other functions in the body. Methods have also advanced dramatically, advancing from examination of animals through dissection of cadavers (dead human bodies) to technologically complex techniques developed in the 20th century including X-ray technology, Sonogram and MRI technology.

Anatomy should not be confused with anatomical pathology (also called morbid anatomy or histopathology), which is the study of the gross and microscopic appearances of diseased organs. - definition adapted from Wikipedia
Anatomist
Animal physiology Branch of physiology concerned with animals.
Application programming interface
Author
Author affiliation author adress
Author set
Autoradiography protocol A technique that uses X- ray film to locate radioactively labeled molecules or fragments of molecules by recording on a photographic plate or emulsion the radiation emitted by radioactive material within the object. (adapted from NCI)
B0 field map
Behavioral neuroendocrinology the study of hormonal processes and neuroendocrine systems that regulate behavior. Behavioral neuroendocrinologist
Behavioural neuroendocrinology
Behavioural neuroendocrinologist
Behavioral neuropharmacology Branch of neuropharmacology dealing with behavior.
Behavioral science From BRO: Behavioural science (or Behavioral science) is a term that encompasses all the disciplines that explore the activities of and interactions among organisms in the natural world. It involves the systematic analysis and investigation of human and animal behaviour through controlled and naturalistic experimental observations and rigorous formulations. (E. D. Klemke, R. Hollinger, and A. D. Kline, (ed) (1980)) - definition adapted from Wikipedia Behavior
Behaviour
Behavioural science
Behavioural scientist
Behavioral scientist
Binary executable Binary executable is a digital entity consisting of the binary representation of machine instructions of a specific processor or they may be binary pseudocode for a virtual machine. A non-source executable file is also called an object program. It is assumed that the binary executable file contains properly-formatted computer instructions. (derived from Wikipedia, Nov 1, 2007) Software application
software program
program
I think we should make "software application" as the preferred label rather than "binary executable"
Biochemical specimen preparation protocol
Biochemistry
Bioengineering The application of engineering principles to address challenges in the fields of biology and medicine. Neurotechnology
Neural Engineering
Bioengineering
Neuroengineering
Technology development
Robotics
Bioinformatics From BRO: Bioinformatics is the application of information technology to the field of molecular biology. The term bioinformatics was coined by Paulien Hogeweg in 1978 for the study of informatic processes in biotic systems. Bioinformatics now entails the creation and advancement of databases, algorithms, computational and statistical techniques, and theory to solve formal and practical problems arising from the management and analysis of biological data. - definition adapted from wikipedia Bio-Informatics
Biology Branch of science concerned with studying living organisms.
Biophysics is an interdisciplinary science that employs and develops theories and methods of the physical sciences for the investigation of biological systems. Studies included under the umbrella of biophysics span all levels of biological organization, from the molecular scale to whole organisms and ecosystems. Biophysical research shares significant overlap with biochemistry, nanotechnology, bioengineering, agrophysics and systems biology.

Molecular biophysics typically addresses biological questions that are similar to those in biochemistry and molecular biology, but the questions are approached quantitatively. Scientists in this field conduct research concerned with understanding the interactions between the various systems of a cell, including the interactions between DNA, RNA and protein biosynthesis, as well as how these interactions are regulated. A great variety of techniques are used to answer these questions.

Fluorescent imaging techniques, as well as electron microscopy, x-ray crystallography, NMR spectroscopy and atomic force microscopy (AFM) are often used to visualize structures of biological significance. Conformational changes in structure can be measured using techniques such as dual polarisation interferometry and circular dichroism. Direct manipulation of molecules using optical tweezers or AFM can also be used to monitor biological events where forces and distances are at the nanoscale. Molecular biophysicists often consider complex biological events as systems of interacting units which can be understood through statistical mechanics, thermodynamics and chemical kinetics. By drawing knowledge and experimental techniques from a wide variety of disciplines, biophysicists are often able to directly observe, model or even manipulate the structures and interactions of individual molecules or complexes of molecules.

In addition to traditional (i.e. molecular and cellular) biophysical topics like structural biology or enzyme kinetics, modern biophysics encompasses an extraordinarily broad range of research. It is becoming increasingly common for biophysicists to apply the models and experimental techniques derived from physics, as well as mathematics and statistics, to larger systems such as tissues, organs, populations and ecosystems.
Biological Physics
Physics
Psychophysics
Biostatistics From BRO: (a combination of the words biology and statistics; sometimes referred to as biometry or biometrics) is the application of statistics to a wide range of topics in biology. The science of biostatistics encompasses the design of biological experiments, especially in medicine and agriculture; the collection, summarization, and analysis of data from those experiments; and the interpretation of, and inference from, the results. - definition adapted from Wikipedia
Block design Box_car_design
Blood Oxygenation Level Dependent signal BOLD
Body system model
Book series volume
Botany branch of biology concerned with plants.
Bright-field imaging protocol
Bright-field transmission optical imaging protocol
Cardinality value
Cell biology Branch of biology concerned with the study of cells and cellular processes.

(formerly cytology, from the Greek kytos, "container") is an academic discipline that studies cells – their physiological properties, their structure, the organelles they contain, interactions with their environment, their life cycle, division and death. This is done both on a microscopic and molecular level. Cell biology research encompasses both the great diversity of single-celled organisms like bacteria and protozoa, as well as the many specialized cells in multicellular organisms like humans.

Knowing the components of cells and how cells work is fundamental to all biological sciences. Appreciating the similarities and differences between cell types is particularly important to the fields of cell and molecular biology as well as to biomedical fields such as cancer research and developmental biology. These fundamental similarities and differences provide a unifying theme, sometimes allowing the principles learned from studying one cell type to be extrapolated and generalized to other cell types. Hence, research in cell biology is closely related to genetics, biochemistry, molecular biology and developmental biology. - definition adapted from Wikipedia
Cytology
Cell-attached single-channel recording protocol
Cell-detached inside-out single-channel recording protocol
Cell-detached inside-out single-channel recording protocol (birnlex 2285)
Cell-detached single-channel recording protocol
Chemistry Branch of science concerned with properties of matter.

(from Egyptian kēme (chem), meaning "earth") is the science concerned with the composition, structure, and properties of matter, as well as the changes it undergoes during chemical reactions. It is a physical science for studies of various atoms, molecules, crystals and other aggregates of matter whether in isolation or combination, which incorporates the concepts of energy and entropy in relation to the spontaneity of chemical processes. Modern chemistry evolved out of alchemy following the chemical revolution (1773).

Scientific_disciplines within chemistry are traditionally grouped by the type of matter being studied or the kind of study. These include inorganic chemistry, the study of inorganic matter; organic chemistry, the study of organic matter; biochemistry, the study of substances found in biological organisms; physical chemistry, the energy related studies of chemical systems at macro, molecular and submolecular scales; analytical chemistry, the analysis of material samples to gain an understanding of their chemical composition and structure. Many more specialized disciplines have emerged in recent years, e.g. neurochemistry the chemical study of the nervous system (see subdisciplines). - definition adapted from Wikipedia
Citation record
Citation record element Those elements defined as a part of the PubMed DTD and used by many literature citation databases
Clarity A method for the transformation of intact tissue into a nanoporous hydrogel-hybridized form (crosslinked to a three-dimensional network of hydrophilic polymers) that is fully assembled but optically transparent and macromolecule-permeable. Clarity protocol
Client program software client
Clinical finding
Clinical pathology Branch of pathology dealing with clinical aspects of pathological examination of excisions and postmortem analysis.
Clinical studies Branch of medicine which is concerned with human clinical trials. From BRO: studies or resources that help investigators do clinical studies or trials, including, epidemiology, outcome development, physiological human studies, interventional trials, etc
Code Profiler A performance analysis tool that measures the behavior of a program as it executes, particularly the frequency and duration of function calls. The profiling process helps to determine which subroutines (or just snippets of code) take longest to execute and which subroutines are called most often. Code profilers are used when you suspect that some part of your code is called very often and maybe there is a need to optimize it, which could significantly improve the overall performance. Profilers use a wide variety of techniques to collect data, including hardware interrupts, code instrumentation, instruction set simulation, operating system hooks, and performance counters.
Code testing framework A resource that provides a software environment created to investigate the quality of the product or service under test, with respect to the context in which it is intended to operate. This includes, but is not limited to, the process of executing a program or application with the intent of finding software bugs.
Cognitive psychology Branch of psychology concerned with the study of cognition
Comment Note
Compiler A resource that provides a computer program (or set of programs) that transforms source code written in a computer language (the source language) into another computer language (the target language, often having a binary form known as object code). The most common reason for wanting to transform source code is to create an executable program. A \\u201ccompiler\\u201d is primarily used for programs that translate source code from a high-level programming language to a lower level language (e.g., assembly language or machine language), and is likely to perform many or all of the following operations: lexical analysis, preprocessing, parsing, semantic analysis, code generation, and code optimization.
Computational Linguistics Computational linguistics is an interdisciplinary field dealing with the statistical or rule-based modeling of natural language from a computational perspective. (from Wikipedia)
Computational biology From BRO: is an interdisciplinary field that applies the techniques of computer science, applied mathematics and statistics to address biological problems. The main focus lays on developing mathematical modeling and computational simulation techniques. By these means it addresses scientific reaserch topics with their theoretical and experimental questions without a laboratory. - definition adapted from Wikipedia Note: this class may need to be collapsed with bioinformatics -AB
Computational model
Computer Axial Tomography imaging protocol CAT imaging protocol
CT Imaging protocol
Conference proceeding
Confocal imaging protocol confocal imaging
confocal microscopy
Contrast enhancement protocol Protocol designed to add contrast to a biological organism or specimen for the purposes of imaging I would change the label of this class to "Contrast enhancement protocol" because these techniques can be used without microscopy
Convolution
Cross-sectional nuclear imaging protocol
Cuff-electrode recording protocol Suction electrode recording protocol
Current clamp voltage recording protocol
DICOM Accession Number A departmental IS generated number that identifies the order for the Imaging Service Request. Accession number DICOM specific term
Dark-field imaging protocol
Dark-field transmission optical imaging protocol
Data access protocol
Data object Datum
Developmental biology Branch of biology concerned with the study of development.
Developmental psychology Branch of psychology that deals with development.
Difference
Differential interference contrast imaging protocol Differential interference contrast microscopy
Nomarski optical imaging protocol
Differential interference contrast optical imaging protocol Differential interference contrast microscopy
Nomarski optical imaging protocol
Diffusion magnetic resonance imaging protocol
Digital Object Identifier
Digital aggregate entity
Digital entity A digital entity is an information entity which is a collection of bits that can be interpreted by a computer. Two digital entities are the same if they are bitwise identical. OBI has this as a child of "non realizable information entity"; we may need to update the entire hierarchy (MEM)
Discussion Discussion among a group in some forum, public, private, or electronic, which may or may not be moderated, for example, a single discussion thread in a listserv (NLM).
Documentation generation software A resource that provides a programming tool that generates documentation intended for programmers (API documentation) or end users (End-user Guide), or both, from a set of specially commented source code files, and in some cases, binary files.
Duration (birnlex 2052)
Dynamic HTML document
Dynamic causal modeling
EM imaging protocol Electron microscopy imaging protocol
Echo planar imaging protocol EPI
Electrical recording protocol Electrophysiology
Electrocardiography recording protocol
Electroencephalography recording protocol Electroencephalography
Electromyography surface recording protocol A macro-electrode recording technique for recording the activation signal of muscles through the use of surface electrode. EMG may also be performed intramuscularly by inserting a needle into the muscle (intramuscular EMG) Electromyography
Electron Energy Loss Spectroscopy imaging protocol Electron Energy Loss Spectroscopy
Electron microscopy immunolabeling protocol Immunolabeling protocol used to localize proteins and other molecules in the electron microscope, e.g., immunogold Ultrastructural immunolabeling protocol
Electron tomography imaging protocol Electron microscopy imaging protocol in which the specimen is imaged as it is tilted along one or more axes.
Electronic laboratory notebook An electronic lab notebook is a software program designed to replace paper laboratory notebooks (adapted from Wikipedia). Electronic lab notebook
Electrophysiology is the study of the electrical properties of biological cells and tissues. It involves measurements of voltage change or electric current on a wide variety of scales from single ion channel proteins to whole organs like the heart. In neuroscience, it includes measurements of the electrical activity of neurons, and particularly action potential activity. - definition adapted from Wikipedia
Electrophysiology concept
Electrosurgery Electrosurgery uses alternating current to achieve cutting and coagulation. The patient becomes part of the electrical circuit and current enters their body. Cautery uses direct current to coagulate. A heated wire or electrode comes in contact with tissue. Vary the voltage of the current and the pattern of electric pulses to achieve your desired cauterizing effect. Adapted from WPI http://www.wpiinc.com/index.php/Virtue-Mart/vmchk.html
End page
Endocrinology is a branch of medicine dealing with disorder of the endocrine system and its specific secretions called hormones. - definition adapted from Wikipedia
Epigenomics The systematic study of the global gene expression changes due to EPIGENETIC PROCESSES and not due to DNA base sequence changes (MeSH) epigenetics
epigenetic
epigenomic
Event-related design
Experimental psychology Experimental psychologists regard psychology as a natural science; research is conducted with the help of experimental methods. The concern of experimental psychology is discovering the processes underlying behavior and cognition. Experimental psychology is a methodological approach rather than a subject and encompasses varied fields within psychology. Experimental psychologists have traditionally conducted research, published articles, and taught classes on neuroscience, developmental psychology, sensation, perception, attention, consciousness, learning, memory, thinking, and language. Recently, however, the experimental approach has extended to motivation, emotion, and social psychology. - definition adapted from Wikipedia
Extracellular electrode recording protocol
FI slope The slope of the current-discharge relationship from discharge threshold slope of FI curve
FR vs. I slope
NeuroElectro Term 17
FMRI beta BETA
Field electrode recording protocol Surface electrode recording protocol
Filtered R-weighted back projection
Firing frequency AP discharge rate firing rate
FR
NeuroElectro Term 9
Fixation protocol
Fluorescence labeling protocol This class should probably be deleted as it is not orthogonal to the axis of classification.
Fluorescence resonance energy transfer imaging protocol FRET protocol
Functional MRI protocol
Gallyas silver stain Silver staining method for revealing neurofibrillary changes in the brains of patients with Alzheimer's disease and related models, developed by F. Gallyas.
Gaussian Random Field A Gaussian random field is a random field involving Gaussian probability density functions of the variables. The initial conditions of physical cosmology generated by quantum mechanical fluctuations during cosmic inflation are thought to be a Gaussian random field with a nearly scale invariant spectrum.(WIkiPedia)
Gene regulatory network model Gene network model
General Linear Model The general linear model (GLM) is a statistical linear model. It may be written as Y = XB + U where Y is a matrix with series of multivariate measurements, X is a matrix that might be a design matrix, B is a matrix containing parameters that are usually to be estimated and U is a matrix containing errors or noise. The residual is usually assumed to follow a multivariate normal distribution. If the residual is not a multivariate normal distribution, generalized linear models may be used to relax assumptions about Y and U. The general linear model incorporates a number of different statistical models: ANOVA, ANCOVA, MANOVA, MANCOVA, ordinary linear regression, t-test and F-test. If there is only one column in Y (i.e., one dependent variable) then the model can also be referred to as the multiple regression model (multiple linear regression). Hypothesis tests with the general linear model can be made in two ways: multivariate and mass-univariate.(WIkiPedia)
Genetics
Genome-wide association study A type of study that examines genetic variation across a given genome, designed to identify genetic associations with observable traits. In human studies, this might include traits such as blood pressure or weight, or why some people get a disease or condition. (Adapted from Wikipedia) genetic association study Not sure whether this is a type of protocol; consider this graph position temporary
Genomics From BRO: The study of the genomes of organisms. The field includes intensive efforts to determine the entire DNA sequence of organisms and fine-scale genetic mapping efforts. The field also includes studies of intragenomic phenomena such as heterosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome. In contrast, the investigation of the roles and functions of single genes is a primary focus of molecular biology and is a common topic of modern medical and biological research. Research of single genes does not fall into the definition of genomics unless the aim of this genetic, pathway, and functional information analysis is to elucidate its effect on, place in, and response to the entire genome's networks. Adapted from Wikipedia
Golgi staining protocol Any of several methods for staining nerve cells, nerve fibers, and neuroglia in which fixed tissue is impregnated with silver nitrate and potassium dichromate resulting in the complete staining of some nerve cells while other cells are not stained at all (http://medical-dictionary.thefreedictionary.com/Golgi%27s+stain). Golgi stain
Golgi impregnation
Government publication
Grant number
Grant sponsor
Grid electrode recording protocol
Group author collaborative author
High-pressure liquid chromotography protocol HPLC protocol
Histochemical protocol Histochemistry
Human subject report patient report
Hydrophobicity model A mathematical description of the solvent interaction properties of an amino acid sequence based on the biophysical properties of the amino acid side chain moeties. Such models are used to indicate putative internal hydrophobic domains and transmembrane spanning regions in polypeptides. hydrophobicity analysis
hydrophobicity plot
Identifying value
Image reconstruction algorithm Algorithm used to compute a reconstruction from a set of images, e.g., R-weighted back projection.
Imaging protocol Imaging
Immunocytochemistry protocol immunocytochemistry
Immunohistochemical protocol A protocol that specifies the process of immunohistochemistry. Immunohistochemistry is the process of localizing proteins in cells of a tissue section exploiting the principle of antibodies binding specifically to antigens in biological tissues. It takes its name from the roots "immuno," in reference to antibodies used in the procedure, and "histo," meaning tissue (compare to immunocytochemistry). (from wikipedia)
Immunolabeling protocol A means of localizing particular antigens within cells or tissue where the localization depends on the interaction of the binding region of an antibody with a specific epitope. The antibody itself may carry a detectable tag, e.g., a fluorophore, or the tag may be applied through additional steps.
Immunology Branch of medicine that concerns itself with the study of the immune system.
Immunoprecipitation protocol A protocol employing immunoprecipitation to separate an antigen from a solution based on antibody binding
In vivo Immunolabeling protocol An immunolabeling protocol in which the primary antibody is applied to living cells or tissues.
In-situ hybridization protocol
Independent Components Analysis A computational method for separating a multivariate signal into additive subcomponents supposing the mutual statistical independence of the non-Gaussian source signals. It is a special case of blind source separation. (from Wikipedia).
Informatics Informatics is a field of study focusing on development and application of information technology.
Information content entity an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
Information entity
International Standard Book Number An ISBN is a 10-digit or 13-digit number that identifies a book for purposes of commerce and supply chains. The last digit of the ISBN is a check digit used to detect transcription errors. This last digit is sometimes an "x".

13 digit ISBNs began to appear on January 1 2005, and all ISBN systems are required to support 13 digits by January 1, 2007.

The first number or numbers of a 10 digit ISBN identifies the country that issued the publishers prefix; this number is followed by a dash and the publisher prefix. 13-digit ISBN's start with either 978 or 979, and the 9 digits that follow correspond to the first 9 digits of a 10-digit ISBN.

The dashes (or spaces) in the ISBN occur in different places depending on the number and are meaningful, but are so frequently omitted that you can't really use the dashes for much.
International Standard Serial Number The ISSN is the standardized international code which allows the identification of any serial publication, including electronic serials, independently of its country of publication, of its language or alphabet, of its frequency, medium, etc. The ISSN number,therefore, preceded by these letters, and appears as two groups of four digits, separated by a hyphen , has no signification in itself and does not contain in itself any information referring to the origin or contents of the publication.

ISSN numbers are assigned by the ISSN national Centres coordinated in a network. All ISSN are accessible via the ISSN Register. The ISSN is not "just another administrative number". The ISSN should be as basic a part of a serial as the title.

  • As a standard numeric identification code, the ISSN is eminently suitable for computer use in fulfilling the need for file update and linkage, retrieval and transmittal of data.
  • As a human readable code, the ISSN also results in accurate citing of serials by scholars, researchers, information scientists and librarians.
  • In libraries, the ISSN is used for identifying titles, ordering and checking in, claiming serials, interlibrary-loan, union catalog reporting etc.
  • ISSN is a fundamental tool for efficient document delivery. ISSN provides a useful and economical method of communication between publishers and suppliers, making trade distribution systems faster and more efficient, in particular through the use of bar-coding and EDI (electronic data interchange).
Intracellular electrode recording protocol
Intracellular injection protocol
Intrinsic emission imaging protocol Intrinsic emission microscopy
Investigation design
Investigation record
Ion channel recording protocol
Ion-sensitive electrode recording protocol
Ionic current model Membrane current model
Issue
Journal article A written composition, usually nonfiction, on a specific topic, forming an independent part of a journal or other publication. Journal article resource
Publication
Laser scanning confocal imaging protocol
Lexical processing algorithm Any text-based algorithm used to match strings against a controlled lexicon and/or infer syntactic structure or semantic conent from a corpus of unstructured text. Text-mining algorithm
Life Science Identifier
Light emitting optical imaging protocol fluorescence/chemiluminescence/phosphorescence optical imaging protocol
Light transmission optical imaging protocol
Link aggregation site A web site containing a curated set of links typically focussed on a particular topic or set of related topics.
Link classification site
Link clustering site
List Listserv or discussion group (as an entity, as opposed to a single discussion thread which uses the value "discussion") (NLM).
Literature corpus literature
Longitudinal magnetization
Longitudinal relaxation time
Longitudinal study design A longitudinal study is a correlational research study that involves repeated observations of the same items over long periods of time , A longitudinal study is a correlational research study that involves repeated observations of the same items over long periods of time, A longitudinal study is a correlational research study that involves repeated observations of the same items over long periods of time
Macro-electrode recording protocol
Macroscopic anatomical structure model anatomical model
Magnetic resonance imaging protocol A protocol that employs magnetic resonance imaging MR imaging protocol
MRI protocol
Mathematics The study of numbers.
Maximum entropy models
Medicine
Metabolomics
Micro-electrode recording protocol
Microbiology
Molecular biology is the study of biology at a molecular level. The field overlaps with other areas of biology and chemistry, particularly genetics and biochemistry. Molecular biology chiefly concerns itself with understanding the interactions between the various systems of a cell, including the interactions between DNA, RNA and protein biosynthesis as well as learning how these interactions are regulated.

Writing in Nature, William Astbury described molecular biology as:

"(...)not so much a technique as an approach, an approach from the viewpoint of the so-called basic sciences with the leading idea of searching below the large-scale manifestations of classical biology for the corresponding molecular plan. It is concerned particularly with the forms of biological molecules and(...) is predominantly three-dimensional and structural—which does not mean, however, that it is merely a refinement of morphology. It must at the same time inquire into genesis and function." - definition adapted from Wikipedia
Molecular neuropharmacology Branch of neuropharmacology dealing with molecular interactions.
Molecular neuroscience is the study of the central nervous system at a molecular level.
Multi-cell model tissue model
Multiphoton imaging protocol An imaging protocol that produces images using a microscopy in multiphoton mode Multiphoton microscopy
Multiphoton imaging
Two-photon imaging protocol
two-photon imaging protocol
2 photon imaging protocol
Multiple electrode extracellular recording protocol
Multiple-electrode voltage clamp recording protocol
Myelin staining protocol
NIH Manuscript Submission ID
Narrative object
Natural language processing algorithm Natural language processing (NLP) is a subfield of artificial intelligence and linguistics. It studies the problems of automated generation and understanding of natural human languages. Natural language generation systems convert information from computer databases into normal-sounding human language, and natural language understanding systems convert samples of human language into more formal representations that are easier for computer programs to manipulate.
Natural science Branch of science that usually includes: Biology, Medicine, Botany, Zoology, and Pathology.
Negative result The outcome of an experiment where the null hypothesis is not refuted. Also, where the dependent variable is not related to the independent variable. negative finding
Nerve cell functional model computational neuronal model
neuronal physiological model
Nerve cell structural model neuronal structure model
Network interaction model
Neural circuit model neural network model
circuit model
nerve cell circuit model
Neuroanatomy Branch of anatomy concerned with the nervous system.
Neurobiology Field of biology that is concerned with the study of the nervous system.
Neurochemistry Branch of science concerned with properties of matter that resides in the central nervous system.
Neuroeconomics Branch of economics that is concerned with neuroscience.
Neuroendocrinology is a branch of medicine dealing with disorder of the endocrine system and its specific secretions called hormones, which effect the nervous system.
Neuroethology Branch of ethology which uses an evolutionary and comparative approach to the study of animal behavior and its underlying mechanistic control by the nervous system. Ethology
Neurogenetics Studies the role of genetics in the development and function of the nervous system. - adapted from Wikipedia
Neuroimmunology Branch of immunology concerned with the connection of the nervous system and the immune system.
Neurology Medical specialty dealing with disorders of the nervous system.
Neuronal tract tracing An assay in which a tracer is injected into one or more regions of the nervous system or its targets that is taken up by cells, axons or axon terminals in order to determine axonal projections to or from that region. The tract tracing assay is used to ascertain the cells of origin that innervate a brain region, the synaptic target of these cells and the route via which the axons travel in the nervous system. axonal tract tracing
neuronal tract tracing
neuronal tracing
Neuropathology Subfield of pathology dealing with excised or postmortem examination of the nervous system tissues. Psychopathology
Neuropharmacology Subdiscipline in pharmacology concerned with drug-induced changes in the functioning of cells in the nervous system. Psychopharmacology
Neurophysiology A discipline which utilizes physiological techniques to study the nervous system. Psychophysiology
Neuropsychology Branch of psychology that studies the structure and function of the brain related to specific psychological processes and overt behaviors.
Neuroscience Branch of science that deals with the study of the nervous system.
Neurosurgery The surgical discipline focused on treating nervous system disease. Neurosurgeon
Neurovirology The study of viruses and virus-like agents and how these effect the central nervous system.
Nissl staining protocol
Noise Sensitivity Measure of the relative changes in a variable of interest as a function of noise.
Non-realizable information entity
Nuclear medicine imaging protocol NMR
Number b=0 volumes number of imaging volumes acquired without any diffusion-weighting gradients applied
Number of b NE 0 volumes number of diffusion-weighted directions multiplied by the number of non-zero b-values
Number of b values number of distinct b-values used
Number of diffusion-weighted directions the number of gradient amplitude vectors used in each complete set of diffusion-weighted data
Nursing From BRO: medical profession focused on patient care.
Oncology is the branch of medicine dealing with tumors (cancer). A medical professional who practices oncology is an oncologist.
Ophthalmology Branch of medicine which deals with the diseases and surgery of the visual pathways, including the eye, brain, and areas surrounding the eye, such as the lacrimal system and eyelids.
Optical imaging protocol Light microscopy imaging protocol
PET imaging protocol * A technique for measuring the gamma radiation produced by collisions of electrons and positrons (anti-electrons) within living tissue. In positron emission tomography (PET), a subject is given a dose of a positron-emitting radionuclide attached to a metabolically active substance (for example, 2-fluoro-2-deoxy-D-glucose (FDG), which is similar to a naturally occurring sugar, glucose, with the addition of a radioactive fluorine atom). When living tissue containing the positron emitter is bombarded by electrons, gamma radiation produced by collisions of electrons and positrons is detected by a scanner, revealing in fine detail the tissue location of the metabolically-active substance administered. (NCI04) (NCI) * An imaging technique using compounds labelled with short-lived positron-emitting radionuclides (such as carbon-11, nitrogen-13, oxygen-15 and fluorine-18) to measure cell metabolism. It has been useful in study of soft tissues such as CANCER; CARDIOVASCULAR SYSTEM; and BRAIN. SPECT is closely related to PET, but uses isotopes with longer half-lives and resolution is lower. (MSH) * For this type of scan, a person is given a substance that reacts with tissues in the body to release protons (parts of an atom). Through measuring the different amounts of protons released by healthy and cancerous tissues, a computer creates a picture of the inside of the body. PET images show the chemical functioning of an organ or tissue, unlike X-ray, CT, or MRI which show only body structure. Also called PET scan. (NCI) * detection of gamma rays emitted from tissues after administration of a natural substance such as glucose or fatty acids into which positron emitting isotopes have been incorporated; the paths of the gamma rays, which result from collisions of positrons and electrons, are interpreted by a computer algorithm, and the resultant tomogram represents local concentrations of the isotope containing substance. (CSP) Positron Emission Tomography imaging protocol
Positron Emission Tomography
PH-sensitive electrode recording protocol
Parameter Fitting
Parameter sensitivity In neural modeling, refers to how model results vary as model parameters are changed.
Part-of-speech tagging algorithm Part-of-speech tagging (POS tagging or POST), also called grammatical tagging, is the process of marking up the words in a text as corresponding to a particular part of speech, based on both its definition, as well as its context, i.e., relationship with adjacent and related words in a phrase, sentence, or paragraph. A simplified form of this is commonly taught school-age children, in the identification of words as nouns, verbs, adjectives, adverbs, etc. Once performed by hand, POS tagging is now done in the context of computational linguistics, using algorithms which associate discrete terms, as well as hidden parts of speech, in accordance with a set of descriptive tags.
Patent A set of exclusive rights granted by the national government to an inventor for a limited period of time in exchange for public disclosure of an invention.
Pathology From BRO: (from Greek πάθος, pathos, "fate, harm"; and -λογία, -logia) is the study and diagnosis of disease through examination of organs, tissues, bodily fluids, and whole bodies (autopsies). The term also encompasses the related scientific study of disease processes, called General pathology. Medical pathology is divided in two main branches, Anatomical pathology and Clinical pathology. Veterinary pathology is concerned with animal disease whereas Phytopathology is the study of plant diseases. - definition adapted from Wikipedia General pathology
Pathway model signaling pathway model
regulatory network model
enzyme network model
Pediatric neuropsychology Medical and psychology specialty concerned with the study of brain-behavior relationships in children with known or suspected brain injury, neurodevelopmental disorders, learning disorders or other congenital disorders.
Pediatrics From BRO: Branch medicine that deals with the medical care of infants, children, and adolescents. Paediatrics
Personal communication Informal communication
Pharmacokinetics pharmacodynamics From BRO: (in Greek: “pharmacon” meaning drug and “kinetikos” meaning putting in motion, the study of time dependency; sometimes abbreviated as “PK”) is a branch of pharmacology dedicated to the determination of the fate of substances administered externally to a living organism. In practice, this discipline is applied mainly to drug substances, though in principle it concerns itself with all manner of compounds ingested or otherwise delivered externally to an organism, such as nutrients, metabolites, hormones, toxins, etc. Pharmacokinetics is often studied in conjunction with pharmacodynamics. Pharmacodynamics explores what a drug does to the body, whereas pharmacokinetics explores what the body does to the drug. Pharmacokinetics includes the study of the mechanisms of absorption and distribution of an administered drug, the rate at which a drug action begins and the duration of the effect, the chemical changes of the substance in the body (e.g. by enzymes) and the effects and routes of excretion of the metabolites of the drug. - definition adapted from Wikipedia
Pharmacology is concerned with drug-induced changes in the functioning of cells. Neuropharmacology
Psychopharmacology
Phase contrast imaging protocol Phase contrast microscopy
Phase contrast optical imaging protocol Phase contrast microscopy
Philosophy is the study of general and fundamental problems concerning matters such as existence, knowledge, truth, beauty, law, justice, validity, mind, and language. Philosophy is distinguished from other ways of addressing these questions (such as mysticism or mythology) by its critical, generally systematic approach and its reliance on reasoned argument. The word is of Greek origin: φιλοσοφία, philosophía, "love of wisdom". - adapted from Wikipedia
Phoenetics Branch of linguistics that comprises the study of the sounds of human speech. It is concerned with the physical properties of speech sounds (phones), and the processes of their physiological production, auditory reception, and neurophysiological perception. - definition adapted from Wikipedia
Physical science Branch of science that usually includes: Physics, Chemistry and Engineering.
Physiological model A mathematical description of the complex physical and temporal dependencies between a set of related biological entities and their immediated environment. Physiological system model
Physiology From BRO: Branch of biology dealing with the study of the mechanical, physical, and biochemical functions of living organisms.

Physiology has traditionally been divided between plant physiology and animal and all living things physiology but the principles of physiology are universal, no matter what particular organism is being studied. For example, what is learned about the physiology of yeast cells may also apply to human cells.

The field of animal physiology extends the tools and methods of human physiology to non-human animal species. Plant physiology also borrows techniques from both fields. Its scope of subjects is at least as diverse as the tree of life itself. Due to this diversity of subjects, research in animal physiology tends to concentrate on understanding how physiological traits changed throughout the evolutionary history of animals. Other major branches of scientific study that have grown out of physiology research include biochemistry, biophysics, paleobiology, biomechanics, and pharmacology. - definition adapted from Wikipedia
Pixel
Plan specification a directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications.
Planar imaging protocol
Plant physiology Branch of physiology concerned with the study of plants.
Polarization contrast imaging protocol Polarization microscopy
Polarization contrast optical imaging protocol Polarization microscopy
Polynomial coefficient scaling coefficient
proportionality coefficient
Population genetics Branch of genetics concerned with genetic variability in a given species.
Post-Tetanic Potentiation is a form of short-term synaptic plasticity resulting from an increased calcium concentration in the presynaptic terminal during relatively high frequency activation of the axon. Posttetanic potentiation
Post tetanic potentiation
PTP
Primary key
Primatology is the study of primates. It is a diverse discipline and primatologists can be found in departments of biology, anthropology, psychology and many others. It is a branch of Physical anthropology, which, in itself, studies the genus Homo, especially Homo sapiens. The fields cross over in the study of the hominids, which include all ape-like ancestors of man and the other great apes (for a list of common ancestors with other living species see The Ancestor's Tale). Modern primatology is an extremely diverse science. It ranges from anatomical studies of primate ancestors and field studies of primates in their natural habitat, to experiments in animal psychology and ape language. It has cast an immense amount of light on basic human behaviors and ancient ancestry of these behaviors. - adapted from Wikipedia
Protein folding model
Protein structure classification A mathematical description of the related structural domains of a collection of amino acid sequence based on the consensus sequences with defined structural properties (e.g., alpha helix, beta sheet, etc.). These models are typically used to infer phylogenetic relatedness of proteins (families/superfamilies) based on structural properties. protein classification
Protocol A plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process (Ontology of Biomedical Investigations OBI_0000272).
Psychiatry Medical specialty officially devoted to the treatment, study and prevention of mental disorders.
Psycholinguistics Part of psychology concerned with the study of language.

The study of the processes through which learners acquire language. By itself, language acquisition refers to first language acquisition, which studies infants' acquisition of their native language, whereas second language acquisition deals with acquisition of additional languages in both children and adults.

One hotly debated issue is whether biology contributes capacities specific to language acquisition, often referred to as universal grammar, or the language acquisition device (LAD). For fifty years, some linguists, notably Noam Chomsky and the late Eric Lenneberg, have argued for the hypothesis that children have innate, language-specific abilities that facilitate and constrain language learning.

Other researchers, including Elizabeth Bates, Catherine Snow, Brian MacWhinney, and Michael Tomasello, have hypothesized that language learning results from general cognitive abilities and the interaction between learners and their surrounding communities. Recent work by William O'Grady proposes that complex syntactic phenomena result from an efficiency-driven, linear computational system. O'Grady describes his work as "nativism without Universal Grammar."

One of the most important advances in the study of language acquisition was the creation of the CHILDES database by Brian MacWhinney and Catherine Snow. - definition adapted from Wikipedia
Language acquisition
Linguistics
Psycholinguist
Psychology Branch of science concerned with the study of human mental functions and behavior.

(Greek: Ψυχολογία, lit. "study of the mind", from ψυχή psykhē "breath, spirit, soul"; and -λογία, -logia "study of") is an academic and applied discipline involving the systematic, and often scientific, study of human mental functions and behavior. Occasionally, in addition or opposition to employing the scientific method, it also relies on symbolic interpretation and critical analysis, although it often does so less prominently than other social sciences such as sociology. Psychologists study such phenomena as perception, cognition, emotion, personality, behavior and interpersonal relationships. Some, especially depth psychologists, also study the unconscious mind.

Psychological knowledge is applied to various spheres of human activity, including issues related to everyday life—such as family, education and employment—and to the treatment of mental health problems. Psychologists attempt to understand the role of mental functions in individual and social behavior, while also exploring the underlying physiological and neurological processes. Psychology includes many sub-fields of study and applications concerned with such areas as human development, sports, health, industry, media and law. Psychology incorporates research from the natural sciences, social sciences and humanities. A professional theorist or practitioner of psychology is called a psychologist. - definition adapted from Wikipedia
Psychometrics From BRO: is the field of study concerned with the theory and technique of educational and psychological measurement, which includes the measurement of knowledge, abilities, attitudes, and personality traits. The field is primarily concerned with the study of measurement instruments such as questionnaires and tests. It involves two major research tasks, namely: (i) the construction of instruments and procedures for measurement; and (ii) the development and refinement of theoretical approaches to measurement. - definition adapted from Wikipedia
PubMed Central ID PMC ID
PubMed ID
Quantitative value
R-weighted back projection A reconstruction algorithm for electron tomography. In R-weighted backprojection, each horizontal line of input data is filtered to weight each spatial frequency proportional to its radius in Fourier space. This is radial weighting, and the filter is referred to as a radial filter.
Rabies-virus-mediated tracing protocol Transynaptic, retrograde tracing protocol that uses a modified rabies virus to trace neuronal circuitry from its source rabies virus mediated tracing
Radiographic imaging protocol
Radiolabeling protocol
Rate-coding model neurons
Reconstituted bilayer electrical recording protocol
Reconstituted bilayer single-channel patch recording protocol Procedure by which a part of cellular membrane is recorded from. The notion is to isolate a single or at least a small number of channels in a "patch" of membrane. patch recording
patch clamp
Region of Interest A Region of Interest, often abbreviated ROI, is a selected subset of samples within a dataset identified for a particular purpose. The concept of an ROI is commonly used in medical imaging. For example, the boundaries of a tumor may be defined on an image or in a volume, for the purpose of measuring its size. The endocardial border may be defined on an image, perhaps during different phases of the cardiac cycle, say end-systole and end-diastole, for the purpose of assessing cardiac function.There are three fundamentally different means of encoding an ROI: * burned in to the dataset, with a value that may or may not be outside the normal range of normally occurring values * as separate purely graphic information, such as with vector or bitmap (rasterized) drawing elements, perhaps with some accompanying plain (unstructured) text annotation * as separate structured semantic information (such as coded value types) with a set of spatial and/or temporal coordinates (WIkiPedia)
Relaxation time
Report A document assembled by an author for the purpose of providing information for the audience. A report is the output of a documenting process and has the objective to be consumed by a specific audience. Topic of the report is on something that has completed. A report is not a single figure. Examples of reports are journal article, patent application, grant progress report, case report (not patient record). (OBI pending final vetting)
Resource:Zygote Body 3D interactive whole body which allows the user to zoom in onto any structure of the body and remove/add layers, focus on specific structures and label. It has a very detailed nervous brain anatomy representation. This program has been developed in association with Google Body. 3D anatomical products from Zygote have been seen in applications online, in broadcast television, films, computer games, educational software, and in medical illustrations and animations. Google Body
Zygote Body & 3D Data
This resource has proven to be very useful to me to grasp the global organization of the nervous system. The 3D modeling is very powerful and the overall quality is impeccable. I highly recommend this resource for getting to know the global structure of the nervous system (and of all the body really).
SEM imaging protocol Scanning electron microscopy imaging protocol
SPECT imaging protocol * A method of computed tomography that uses radionuclides which emit a single photon of a given energy. The camera is rotated 180 or 360 degrees around the patient to capture images at multiple positions along the arc. The computer is then used to reconstruct the transaxial, sagittal, and coronal images from the 3-dimensional distribution of radionuclides in the organ. The advantages of SPECT are that it can be used to observe biochemical and physiological processes as well as size and volume of the organ. The disadvantage is that, unlike positron-emission tomography where the positron-electron annihilation results in the emission of 2 photons at 180 degrees from each other, SPECT requires physical collimation to line up the photons, which results in the loss of many available photons and hence degrades the image. (MSH) * method of computed tomography that uses radionuclides which emit a single photon of a given energy: the camera is rotated 180 or 360 degrees around the subject to capture images at multiple positions along the arc; the computer is then used to reconstruct the transaxial, sagittal, and coronal images from the three-dimensional distribution of radionuclides in the organ. (CSP) Single Photon Emission Computed Tomography imaging protocol
Single Photon Emission Computed Tomography
STEM imaging protocol Scanning transmission electron microscopy imaging protocol
Sag ratio Ratio between exponentially extrapolated voltage and steady-state voltage sag-ratio
sag index
sag
NeuroElectro Term 13
Scientific discipline a branch of scientific knowledge. Academic discipline
Area of research
Area of study
Sequence homology model A mathematical description of the phylogenetic relatedness of a set of nucleic acid sequences based on a correlative comparison of linear sequence. homology model
Sequence-based model A mathematical description of the relatedness of a set of nucleic acid or amino acid sequences based on a correlative comparison of the sequences or properties derived from those sequences.
Serial number number
Serial publication element
Serial title Journal title
Short-term Synaptic Plasticity Changes in the Input(presynaptic cell APs)/Output(firing pattern or sub-threshold voltage responses) of a cell reflecting changes in the strength of the connection between cells or changed ionic conductances of the postsynaptic cell (usually over a half second to second). STP
Signal processing algorithm A mathematical separation and/or combination of time-series data typically performed in real-time and utilizing Fourier transform methods to manipulate the distinct frequency components of a set of an input data stream to produce an output data stream. DSP algorithm
Digital signal processing algorithm
Silver stain Staining method that uses silver to selectively alter the appearance of a target in microscopy of histological sections; in temperature gradient gel electrophoresis; and in polyacrylamide gels (adapted from Wikipedia: http://en.wikipedia.org/wiki/Silver_stain)
Simplified Model
Single electrode extracellular recording protocol
Single tilt electron tomography imaging protocol Electron tomography protocol where the specimen is imaged at intervals as it is rotated along a single axis
Single-electrode voltage clamp recording protocol
Slice preparation protocol Protocol in which slices of tissue are excised from an animal and kept alive in vitro. Slice preparation
Social psychology Branch of psychology concerned with the study of social interactions. Social neuroscience
Social science Branch of science that usually includes: Psychology, Sociology, Anthropology
Software development environment A resource that provides the entire environment (applications, servers, network) that provides comprehensive facilities to computer programmers for software development. An SDE typically includes an integrated development environment (IDE, comprising source code editor, compiler, build automation, debugger), requirement management tools, design modeling tools, documentation generation tools, code analysis tools, and so on.
Software development tool
Spatial value
Spatio-temporal Activity Patterns In neural tissue or in models of neural networks, patterns of spiking activity that change over both space and time. Spike train has no space so is not a superclass but instead something related.
Specimen preparation protocol
Spectroscopic imaging protocol Spectroscopic microscopy
Spike Frequency Adaptation Repetitive spiking that decreases in frequency over time. Eventually, spiking activity may cease.
Spontaneous firing rate AP discharge rate in the absence of current injection or a stimulus spontaneous firing frequency NeuroElectro Term 18
Staining protocol
Start page
Static HTML document
Statistical Parametric Mapping Statistical Parametric Mapping refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional imaging data. These ideas have been instantiated in software that is called SPM. The SPM software package has been designed for the analysis of brain imaging data sequences. The sequences can be a series of images from different cohorts, or time-series from the same subject. The current release is designed for the analysis of fMRI, PET, SPECT, EEG and MEG (http://www.fil.ion.ucl.ac.uk/spm/).
Statistics Branch of mathematics dealing with statistical phenomena.
Structural MRI protocol MRI
Structural model A coordinate-based mathematical description of a collection of biological structures.
Study
Stuttering In neurons, rythmic high frequency bursts of action potentials with unpredictable periods of quiescence.
Subject report
Synaptic Integration Integration of postsynaptic currents.
Synaptic Plasticity Refers to capability for change in synaptic efficacy.
Synchronization Simultaneous occurance of neural events such as coincident spiking or in phase oscillations in activity in neurons or neuronal networks.
Systems neuroscience is a subdiscipline of neuroscience which studies the function of neural circuits and systems, most commonly in awake, behaving intact organisms. It is an umbrella term, encompassing a number of areas of study concerned with how nerve cells behave when connected together to form neural networks: vision, for example, or voluntary movement. At this level of analysis, neuroscientists study how different neural circuits analyze sensory information, form perceptions of the external worlds, make decisions, and execute movements. Researchers concerned with systems neuroscience focus on the vast space that exists between molecular and cellular approaches to the brain and the study of high-level mental functions such as language, memory, and self-awareness (which are the purview of behavioral and cognitive neuroscience). Systems neuroscientists typically employ techniques for understanding networks of neurons while they function in vivo (e.g. electrophysiology (single or multi-electrode recording), in vivo imaging, fMRI, PET). The term is commonly used in an educational framework: a common sequence of graduate school neuroscience courses consists of cellular/molecular neuroscience for the first semester, then systems neuroscience for the second semester. It is also sometimes used to distinguish a subdivision within a neuroscience department at an academic institution. - definition adapted from Wikipedia Systems
T1 relaxation time
T1 weighted protocol
T2 relaxation time transverse relaxation time
T2 weighted protocol
T2* relaxation time T-two-star
TA MRI acquitision time
TE MRI echo time
TEM imaging protocol Transmission electron microscopy imaging protocol
TR MRI repetition time
Temporal Pattern Generation Refers to process where networks of neurons or neural network models exhibit patterns of activity (membrane potential or actional potentials) that vary over time. Single neurons or neuron models may also exhibit temporal patterns of activity such as changes in action potential frequency. Is this the same as central pattern generator? No, CPG is more specific (an example of a temporal pattern) and relates to motor systems only. Temporal patterns can be more general.
Temporal characteristic value
Theology
Thesis A document submitted in support of candidacy for an academic degree or professional qualification presenting the author's research and findings. dissertation
Title primary title
Title set
Total internal reflection imaging protocol Total internal reflection microscopy
Total internal reflection optical imaging protocol Total internal reflection microscopy
Toxicology From BRO: Branch of science which studies the adverse effects of chemicals on living organisms.
Tract tracing protocol Methods used to determine connectivity between brain structures or neuron populations
Tractography a 3D modeling technique used to investigate and visualize neural tracts using data collected by diffusion tensor imaging (DTI). It uses special techniques of magnetic resonance imaging (MRI), and computer-based image analysis. The results are presented in two- and three-dimensional images (modified from Wikipedia). tractography protocol
Transverse magnetization
Ultrasonographic imaging protocol * RAEB: The visualization of deep structures of the body by recording the reflections of echoes of pulses of ultrasonic waves directed into the tissues. Use of ultrasound for imaging or diagnostic purposes employs frequencies ranging from 1.6 to 10 megahertz. (MSH99) (NCI) * The visualization of deep structures of the body by recording the reflections of echoes of pulses of ultrasonic waves directed into the tissues. Use of ultrasound for imaging or diagnostic purposes employs frequencies ranging from 1.6 to 10 megahertz. (MSH) * Use of ultrasound for imaging or diagnostic purposes. Employs frequencies ranging from 1.6 to 10 megahertz. (DCTD-DIP) (NCI) * high frequency sound waves used to identify and examine internal organs and structures without the invasive hazards of X xays, dyes, or fluoroscopy. (CSP) Echography
Ultrasonography
Ultrasonic imaging protocol
Sonography
Ultrasound imaging protocol
Ultrasound imaging procedure
Unfiltered R-weighted back projection
Universal Trial Number The aim of the Universal Trial Number (UTN) is to facilitate the unambiguous identification of clinical trials. The UTN is not a registration number.

The UTN is a number that should be obtained early in the history of the trial. The UTN should:

  • become permanently attached to the trial
  • be used whenever information about the trial is communicated
  • become part of the trial's identity
  • be documented in the trial protocol
  • be submitted every time the trial is registered
It is recognized that some UTNs will be attached to trials that do not progress; that is, trials that never become fully developed protocols and that never recruit participants. Some UTNs will therefore never appear attached to a registered trial.
UTRN
Value
Vector
Version source control system A resource that provides a system for the management of multiple revisions of the same unit of information. It is most commonly used in engineering and software development to manage ongoing development of digital documents like application source code, art resources such as blueprints or electronic models, and other projects that may be worked on by a team of people. Revision control
Version control (system)
(source) code management
Source control
Virology The study of viruses and virus-like agents: their structure, classification and evolution, their ways to infect and exploit cells for virus reproduction, the diseases they cause, the techniques to isolate and culture them, and their use in research and therapy. Virology is often considered a part of microbiology or of pathology. - adapted from Wikipedia
Voltage clamp current recording protocol
Volume (birnlex 2391)
Voxel
Web service A resource that provides a software system designed to support interoperable machine-to-machine interaction over a network. Web services are frequently Web APIs that can be accessed over a network, such as the Internet, and executed on a remote system hosting the requested services.


NITRC definition: Specific functions provided to applications via standard Internet protocols (XML, SOAP, WSDL, UDDI).
Website A connected group of pages on the World Wide Web regarded as a single entity, usually maintained by one person or organization and devoted to a single topic or several closely related topics.
Western blot protocol A protocol that uses a Western blot assay to identify and quantify a binder protein interaction. A mixture of protein is first submitted to an electrophoresis in denaturing condition and then electro-transferred from the gel to a membrane. The membrane is then incubated with a primary antibody specific for a given protein or a specific residue modification in the sample under analysis. A secondary antibody, radiolabelled or fused to fluorophore or to a chromogenic enzyme, targets the first antibody and allows the visualisation of the protein band on the membrane. (Adapted from the Protein Affinity Reagent ontology)
Whole-cell voltage clamp recording protocol
Wide-field fluorescence imaging protocol
Zoology Branch of biology that focuses on the structure, function, behavior, and evolution of animals. The correct pronunciation of "zoology" is /zoʊˈɑləʤɪ/. zoölogy

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