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From NeuroLex
| Abbrev
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ArrayExpress +
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| Availability
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Open +
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| CurationStatus
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curated +
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| DefiningCitation
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http://www.ebi.ac.uk/arrayexpress/ +
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| Definition
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Database of functional genomics experiment … Database of functional genomics experiments including gene expression where you can query and download data collected to MIAME and MINSEQE standards. Gene Expression Atlas contains a subset of curated and re-annotated Archive data which can be queried for individual gene expression under different biological conditions across experiments.
The ArrayExpress Archive is one of the three international public repositories of functional genomics data supporting publications. It includes data generated by sequencing or array-based technologies. Data are submitted by users and imported directly from the NCBI Gene Expression Omnibus. The ArrayExpress Archive is closely integrated with the Gene Expression Atlas and the sequence databases at the European Bioinformatics Institute. Advanced queries provided via ontology enabled interfaces include queries based on technology and sample attributes such as disease, cell types and anatomy.
The Repository contains data from over 22583 experiments comprising approximately 638430 assays. The majority of the data are array based, but other data types are included, including ultra high-throughput sequencing transcriptomics and epigenetic data.
All the data and array designs in ArrayExpress are available for direct download in a number of different formats. Submissions are welcome. ifferent formats. Submissions are welcome.
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| ExampleImage
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ArrayExpress.PNG +
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| Grant
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Category:226073 +,
Category:200754 +,
Category:P41 HG003619 +
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| Has default formThis property is a special property in this wiki.
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Resource +
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| Has role
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Database +,
Data repository +
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| Id
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nif-0000-30123 +
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| Is part of
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Resource:European Bioinformatics Institute +
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| Keywords
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Genomics +,
Experiment +,
Gene +,
Gene expression +,
Microarray +,
Array +,
Bio-measurement +,
Atlas +,
Assay +,
Epigenetics +,
Gold standard or authority +,
Molecular neuroanatomy resource +,
Functional genomics +
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| Label
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Resource:ArrayExpress Archive +
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| Modification dateThis property is a special property in this wiki.
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27 February 2013 18:45:25 +
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| ModifiedDate
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27 February 2013 +
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| PMID
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21071405 +
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| Page has default formThis property is a special property in this wiki.
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Resource +
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| RelatedTo
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Resource:Gene Expression Atlas +,
Resource:DataCite +
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| SuperCategory
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Resource +
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| Supporting Agency
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Resource:European Molecular Biology Laboratory; Heidelberg; Germany +,
European Commission +,
(SLING) +,
Gen2Phen +,
National Human Genome Research Institute +,
National Institute of Biomedical Imaging and Bioengineering +,
National Cancer Institute +
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| Categories |
Resource
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