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Abbrev BioGRID  +
Address Canada  +
Availability Public +, Free +, Only for research +, The community can contribute to this resource +
Comment Start date: 2003 <br /> Type: Disciplinary <br /> Deposit: Accepting data for deposit -
CurationStatus uncurated  +
DefiningCitation  +
Definition A curated protein-protein and genetic inte A curated protein-protein and genetic interaction repository of raw protein and genetic interactions from major model organism species, with data compiled through comprehensive curation efforts. The current version searches over 41,000 publications containing over 720,000 interactions (June 2014) and contributions are welcome. Complete coverage of the entire literature is maintained for budding yeast (S. cerevisiae), fission yeast (S. pombe) and thale cress (A. thaliana), and efforts to expand curation across multiple metazoan species are underway. Current curation drives are focused on particular areas of biology to enable insights into conserved networks and pathways that are relevant to human health. It provides interaction data to several model organism databases, resources such as Entrez-Gene, SGD, TAIR, FlyBase and other interaction meta-databases. The entire BioGRID 3.0 data collection may be downloaded in multiple file formats, including IMEx compatible PSI MI XML. For developers, BioGRID interactions are also available via a REST based Web Service and Cytoscape plugin. ST based Web Service and Cytoscape plugin.
ExampleImage BioGRID.PNG +
Grant Category:R01 RR024031   +
Has default formThis property is a special property in this wiki. Resource  +
Has role Database +, Software resource +, Data repository +
Id nif-0000-00432  +
Is part of Princeton University; New Jersey; USA +, University of Edinburgh; Scotland; United Kingdom +, Mount Sinai Hospital; Ontario; Canada +, University of Montreal; Quebec; Canada +
Keywords Budding yeast +, Fission yeast +, Protein +, Gene +, Protein interaction +, Genetic interaction +, Model organism +, Interaction +, Data set +, Gene annotation +, Phenotype +, Orthologous interaction +, Yeast +, Cellular interaction network +, Physical interaction +, Protein-peptide +, Protein-RNA +, Protein-protein interaction +, Genetics +, Publication +, Raw protein +, Web service +, Pathway +, Network +, Biology +, Gene mapping +, Statistics +
Label Resource:BioGRID  +
Listedby +, Resource:OMICtools +, Resource:DataCite +
Modification dateThis property is a special property in this wiki. 30 January 2015 23:02:50  +
ModifiedDate 30 January 2015  +
PMID 23203989, 21071413, 16381927, 12620108  +
Page has default formThis property is a special property in this wiki. Resource  +
RelatedTo Resource:Cytoscape +, Resource:PSI-MI +
Related application Research  +
Species Saccharomyces cerevisiae +, Schizosaccharomyces pombe +, Arabidopsis thaliana +, Metazoa +, Human +, Mouse +, Caenorhabditis elegans +, Drosophila melanogaster +, Other +
SuperCategory Resource  +
Supporting Agency National Institutes of Health +, Biotechnology and Biological Sciences Research Council +, Canadian Institutes of Health Research +
Synonym Biological General Repository for Interaction Datasets  +
Twitter biogrid  +
Usedby Resource:NIF Data Federation +, Resource:Monarch Initiative +
Xref OMICS_01901  +
Categories Resource
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Resource:APID: Agile Protein Interaction DataAnalyzer +, Resource:ConsensusPathDB +, Resource:FlyMine +, Resource:IMEx - The International Molecular Exchange Consortium +, Resource:Integrated Manually Extracted Annotation +, Resource:Integrated Molecular Interaction Database +, Resource:Interaction Reference Index +, Resource:PSICQUIC Registry +, Resource:Pathway Commons +, Resource:TissueNet - The Database of Human Tissue Protein-Protein Interactions + RelatedTo


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*Note: Neurolex imports many terms and their ids from existing community ontologies, e.g., the Gene Ontology. Neurolex, however, is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.