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Category:Resource:EcoliWiki
Abbrev EcoliWiki  +
Comment org-id: ecoliwiki
CurationStatus uncurated  +
DefiningCitation http://ecoliwiki.net/colipedia/index.php/Welcome_to_EcoliWiki  +
Definition A component of EcoliHub, EcoliWiki is a wi A component of EcoliHub, EcoliWiki is a wiki-based system for finding, editing, and adding information about E. coli K-12 and other model organism strains of E. coli. EcoliWiki is being constructed to include information about bacteriophage, plasmids, and mobile genetic elements. Information should be easily accessible and correct, and users have the right to edit any information they feel is incorrect. Most of the E. coli information was initially seeded with a subset of information from parsing EcoCyc data dumps. For phage gamma and the F plasmid, Genbank accessions were converted to GFF, which was parsed into the appropriate tables. Other sources of content include: * user additions * monthly addition of annotations from EcoCyc * structural data from the PDB * domains and motif information from InterPro * various databases including EcoGene, RegulonDB, Genbank, GenoBase, ASAP * many many scientific papers EcoliWiki participates in the RefGenome project. EcoliWiki provides REST web services as part of the EcoliHub Web Services infrastructure project. liHub Web Services infrastructure project.
ExampleImage EcoliWiki.PNG +
Grant Category:U24GM088849   +
Has default formThis property is a special property in this wiki. Resource  +
Has role Wiki +, Web service +
Id nlx_68806  +
Is part of Resource:PortEco +
Keywords Phantom gene +, Genome sequence +, Bacteriophage +, Escherichia coli +, E. coli +, Prokaryotic +, Gene +, Model organism +, Annotation +
Label Resource:EcoliWiki  +
Modification dateThis property is a special property in this wiki. 3 July 2012 00:09:57  +
ModifiedDate 3 July 2012  +
Page has default formThis property is a special property in this wiki. Resource  +
Species Escherichia coli +
SuperCategory Resource  +
Supporting Agency National Institute of General Medical Sciences +
Categories Resource
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*Neurolex imports many terms from existing community ontologies, e.g., the Gene Ontology. We try to re-use the original identifier when possible and often import content from the original ontology. However, Neurolex is a dynamic site and any content beyond the identifier should not be presumed to reflect the content or views of the source ontology. Users should consult with the authoritative source for each ontology for current information.