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Category:Resource:BioMart Project
Availability GNU Lesser General Public License +
CurationStatus curated  +
DefiningCitation  +
Definition A query-oriented data management system th A query-oriented data management system that can be used with any type of data and is particularly suited for providing 'data mining' like searches of complex descriptive data. BioMart comes with an 'out of the box' website that can be installed, configured and customized according to user requirements. Further access is provided by graphical and text based applications or programmatically using web services or API written in Perl and Java. BioMart has built-in support for query optimization and data federation and in addition can be configured to work as a DAS 1.5 Annotation server. The process of converting a data source into BioMart format is fully automated by the tools included in the package. Currently supported RDBMS platforms are MySQL, Oracle and Postgres. platforms are MySQL, Oracle and Postgres.
ExampleImage BioMart.PNG +
Grant Category:contract LHSG-CT-2004-512092   +
Has default formThis property is a special property in this wiki. Resource  +
Has role Software resource +, Web service +
Id nif-0000-30184  +
Is part of Resource:Ontario Institute for Cancer Research +, Resource:European Bioinformatics Institute +
Keywords Biology +, Management +, Data mining +, Search +, Descriptive +, Graphical +, Application +, Perl +, Java +, Gold standard +
Label Resource:BioMart Project  +
Modification dateThis property is a special property in this wiki. 2 February 2015 04:33:56  +
ModifiedDate 2 February 2015  +
Page has default formThis property is a special property in this wiki. Resource  +
SuperCategory Resource  +
Supporting Agency Wellcome Trust +, Resource:European Molecular Biology Laboratory; Heidelberg; Germany +, European Union +, FP6 Programme +, Government of Ontario +
Synonym BioMart software  +
Categories Resource
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Resource:MGI + RelatedTo
Resource:Blueprint Epigenome + Uses


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