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Category:Resource:Bovine Gene Atlas
Abbrev BGA  +
CurationStatus uncurated  +
DefiningCitation http://bovineatlas.msstate.edu/  +
Definition A compendium of over 7.2 million unique 20 A compendium of over 7.2 million unique 20 base transcript tags profiled from 81 tissues acquired from the cow “L1 Dominette 01449” , her male fetus, her 255 day old heifer calf, and her father. The BGA tags were generated on Illumina’s GA1 sequencing platform. L1D’s genome (build: 3.1) was sequenced at the Baylor College of Medicine and Genome Canada sequenced EST and full-length transcripts from the same tissues used for the BGA. Tissues were chosen as a source of total RNA to minimize sequence differences between cDNA tags and genomic or expressed sequence and increase the probability of unequivocally mapping tags to build 3.1. The BGA is comprised of cardiovascular, digestive, endocrine, lymphatic, muscular, nervous system, reproductive and urinary tissues sampled from animals in the fetal, juvenile, and adult stages of development. This cover is a portal to view the tags positioned on the 3.1 build using GBrowse, and a new database schema for positional and functional queries. ema for positional and functional queries.
Grant Category:2006-35616-16648   +, Category:1265-31000-098D (BFGL)   +, Category:5434-31000-014-00D (LARRL)   +, Category:5438-31000-085-00D (USMARC)   +, Category:2008-34609-19318   +
Has default formThis property is a special property in this wiki. Resource  +
Has role Expression atlas +
Id nlx_43343  +
Is part of Mississippi State University; Mississippi; USA +
Keywords Gene expression +, Neuroanatomy +
Label Resource:Bovine Gene Atlas  +
Modification dateThis property is a special property in this wiki. 11 February 2013 21:52:09  +
ModifiedDate 11 February 2013  +
PMID 20961407  +
Page has default formThis property is a special property in this wiki. Resource  +
Species Bos taurus +
SuperCategory Resource  +
Supporting Agency (Cooperative State Research Education and Extension) +, (Agricultural Research Service) +, CSRESS +
Synonym Bovine Gene Atlas: An Extensive Compendium of Bovine Transcript Profiles  +
Categories Resource
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